Gene Msil_3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3733 
Symbol 
ID7093087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp4093454 
End bp4095142 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content62% 
IMG OID643467018 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_002363977 
Protein GI217979830 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4993] Glucose dehydrogenase 
TIGRFAM ID[TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACATG ATGTGTTGCG CCGCCTCGCG TTTGCGGGCG TCGCCATGGC CGCGATTGTC 
TGCGCAGCGA CTCTGCCGTC GCGCGCGGCG GATTCGCTGA GCGCCGGGAA CGCCCGTCCG
AACGATTGGC CGGAATATCA TCGCACCTGG AACGCCTGGC GTTACAGCCC GCTGGATCAG
ATCAACGCCA AGAATGTCGG CAAGCTGCGC GTCGCCTGGA TCCATCAGCC GGGCGATATT
ACCAGCGGCT TGCTGTCGAC CCCGCTCGTC GCGGACGGTA TTTTCTACTA TGTCGCCGCC
AACGACAATG TGTTCGCGTT GAATGGCGCG ACAGGCGAGA AGCTGTGGCA TTATCAACCA
AAGCTTGCTC CGGTGGCGAG CCAGAGTTTC TACGCCTCGC AGATTCGCAA TATTTCGATG
GGGCATGGCT TCATCTATCT TGGCACGCTT GACGGGCGGG TGGTCGCGAT CGACCAGAAG
ACCGGCAAGG AGGCGTGGTC CTCTGTCCCG CTGGTCGATC TCAAGAAATG CTATGGCTGT
CTTTTCTCGT CGACGCCGGT CCTCGCGGGC GATGTGCTCG TCGGCGGCAC GACGGGCGGC
GACCAGCCGA TCGCCGGCCA GATTTTCGGC GTTGACGCGC ACACCGGCAA ATTGCTTTGG
ACGTTCAAGA CGACCAAGGA CGATCCGAAG AGCTGGCCGG GGGATACGGG CGCAGTCGGC
GGCAGCACGG CCTGGAATGT CGGCACCTAT GATCCGACCA CCGACACGGT GTTCATCGGG
GTCGGCAACG CCGCGCCGGA TTTCTATTGG AACGACCGCC ACGGCGACAA TCTCTATTCG
GCCTCGCTCC TCGCCCTCGA TCCGAAAACG GGCAAACTCA AATGGCACCG CCAGGAAGTG
CCGGGCGATC ACTACGACTA CGACGCCTCC TATGAGGCCG TCGTCATCGA CCACGAGGGC
AAGCAGCTCA TCATGCATTT GAGCAAGAGC GGCTTCGTCT TCGTGATGGA CAAGGAGGAC
GGCAAGCTTT TCAATGTGTG GCCACTTGCG GAAAACTACA ATTGGGTGAA AAGCATCAAC
CCGAAGACGG GCGAACTTGT CGGCCAGCTT GGCGACTTTC CGCTTGATAA GGAGACGGTG
CTTTGTCCCT ATCTGCTTGG CGTGCGCAGC TGGAACGCGG GCGCCTACAA TCCCAAGACC
AAGCTCTGGT ACACCAATGC GATGGAGGTC TGCCAGACCT TGGTCCCGGC CAAGCAGGAC
GTCTCCAAGA TCGGCATCGC CGGGCTCTAT CTCGGCGTTT CGAAGCTTGA GGCGGTCGCG
CCGCCGAACG CTCCGGCAAG CGCAAGGCTG GACGCCCGCG ATCCGCTGAC CGGCAAGCTG
AAATGGAGCG TGCCCTATTC GATCCCGGGC CTTGGCGGCG TGCTGACCAC AGCAGGCGGC
CTTGTGTTCA ACGGCGATCC GCAAGGGCTG GTGCACGCCT ATGATGCGGA GACCGGCAAG
GATCTGTGGC GCTTCAACGT CGGGTCGGGC GTGCGCGCAG GCATCATCAG CTATGCCGTC
GACGGCAAGC AATATATCTC CGTGCCGGCT GGGTGGGGAT CGCTGGCGCC GGGCTTCATG
GCGAGCGCCT TCCCGGATGT GAGCAAGCTG CAAGGCGGCG CCGCCATCGT GACGTTCGTG
CTGGAATAA
 
Protein sequence
MGHDVLRRLA FAGVAMAAIV CAATLPSRAA DSLSAGNARP NDWPEYHRTW NAWRYSPLDQ 
INAKNVGKLR VAWIHQPGDI TSGLLSTPLV ADGIFYYVAA NDNVFALNGA TGEKLWHYQP
KLAPVASQSF YASQIRNISM GHGFIYLGTL DGRVVAIDQK TGKEAWSSVP LVDLKKCYGC
LFSSTPVLAG DVLVGGTTGG DQPIAGQIFG VDAHTGKLLW TFKTTKDDPK SWPGDTGAVG
GSTAWNVGTY DPTTDTVFIG VGNAAPDFYW NDRHGDNLYS ASLLALDPKT GKLKWHRQEV
PGDHYDYDAS YEAVVIDHEG KQLIMHLSKS GFVFVMDKED GKLFNVWPLA ENYNWVKSIN
PKTGELVGQL GDFPLDKETV LCPYLLGVRS WNAGAYNPKT KLWYTNAMEV CQTLVPAKQD
VSKIGIAGLY LGVSKLEAVA PPNAPASARL DARDPLTGKL KWSVPYSIPG LGGVLTTAGG
LVFNGDPQGL VHAYDAETGK DLWRFNVGSG VRAGIISYAV DGKQYISVPA GWGSLAPGFM
ASAFPDVSKL QGGAAIVTFV LE