| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3727 |
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| Symbol | |
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| ID | 7093081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 4085555 |
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| End bp | 4087516 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643467012 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002363971 |
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| Protein GI | 217979824 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.368153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTAGGC AAAGCCGCGT CGCTCATATC GATGAAGTGC TCGGCCTCAT GATGGGCCAG
ACTTCGGAGC GTGACAGGGT CATTCACGAA TCCTGGCGCC GCTGCGTGAC GGAGCACGGG
CTCGATCCGA TCGCCTCGCG CGACGCCTAT ATCCTGCCGC AGGAGCGTCT CAATGAACAT
CGCGACGCGA TGGAAGAATT TCTGCACACG GCGCGATTCG GCCTCGAAAC GCTATATCGC
CAAGTGTCCT GCCTCGATTA TGTGATGCTG CTGACGGACG CCAAGGGCGT CACCGTCGAT
TTCATGGGCG ATCCGACCTA TAGCGGCTAT CTGCGCAAGG CGGGCCTCTA TCTCGGCTCC
GATTGGCACG AGGAGCTTGC AGGGACATGC GCGGTCGGCA CCTGCATCGC CACCGGCGAA
CCCCTCATCG TGCATCAAAG CGATCATTTT GACGCCTCGC ACATCTCGCT GACCTGCACC
TGCGCGCCCA TCTTCGACAC CAATGGCGAC CTTGCCGCCG CGCTCGATAT CTCGGCGCTT
CATTCGCCCG AGCCCAAGCT TAGCCAGCAT CTGGCGCTGC AGCTCGTGCG AAGCTTCACG
CATAAGATCG AAAATGCGAA TTTGCTCAAT CGCTTTCGCG GCGAGTGGAT TTTGAAGCTG
TCGAAAGCCC AGGAATTCCT CGACATCGAT CCCGAATACA TCCTCGCGGT CGACGCCAAC
GGCTGCATCA TCGGCCATAA CAGCCGCACG CGAGAGCTGC TCGCCCGCGA ATCCCGTCGG
CTCGGCGATG AGAAGGATCG TTTCATCGGC GAACCCCTGT CGGCGTTTTT TGAATGCGAC
GTCTCGACCT TGCCGCGATT CGCCCGGTTC CGCCCAAGCG ATCAGCGCAC CATGCGGCTT
GTCAGCGGCG GCGCGATGTT GTTCGCGCAG GCGATGCCGC CGCCGCTCGC CTCTCTGCCG
CGCCAGCCGG CGACGCCAGG CCCCAATCTG CCGTTGCCGC TGCGCGAAAT GTTTTCCGGC
GATCCGATGA TGTTCGAGGC GTTGCGGCGC GCTGCCAAGA TCGTCGGCAC GCAAATGAGC
ATCCTCATCC AGGGCGAGAC AGGGACCGGC AAGGAGCATC TCGCCAAGGC GCTGCACGCG
GCCTCGCCCC GCGCCGACAA GCCATTCGTT GCGGTAAACT GCGCGGCGCT GCCGGAGAGC
CTGATCGAGA GCGAATTGTT CGGCTACGAG GCGGGATCAT TCACCGGAGC GGCGAGCAAG
GGCAAGAAGG GACTGGTGCT TGGCGCCGAG GGGGGCACCC TGTTCCTCGA CGAGATCGGC
GACATGCCGC TGGCCTCGCA GACGCGTCTT TTGCGCGTGC TTGCCGAGCG CGAGGTGACG
CCGCTCGGCA AGGTCAAGCC GATCCCGATC GACATAAGGG TGATCGCTGC GACCCACCGG
GACCTCGTCG AACTCGTCAA AGCCAAGAGT TTTCGCGAGG ATCTTTATTT CCGGCTCAAC
GGCGCTGTTC TGACTCTGCC GCCGCTGCGC AGCCGCATCG ACGTCAAATG GCTGATCGAG
CGTCTCTTGC AACGAGGGTC GAACCGGGAT GGCGCGCGCC GCCATCTGAG CGACGCGGCC
CTTGCCGCTC TCTGCGCCTA TTCCTGGCCC GGCAATGTCC GCGAACTGGT CAATTGTCTC
GATTACGCCA GCGCCGTCTG CTCCGAGCAG CAGATCGAGG TCGAGGATTT GCCTGAATCG
ATCATCAAGA GCCTCAACGG CGCCGGCCCA GCTGCGCTGG CGGCGGATCG CGCCGGAGAC
GAGAGTCCGC AGTCCGACGC TTTGAACGGG CTCGAGGAGG CGTTGCGCGA GCATCATTGG
AACGTCTCCG CGGTCGCGCG CGCGCTTGCG GTGGATCGCT CGACGGTGCA TCGGCGGATG
CGGCGGCTTG GCCTTGTGCC GCCGCAAAAG CGGGATTTCT GA
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| Protein sequence | MIRQSRVAHI DEVLGLMMGQ TSERDRVIHE SWRRCVTEHG LDPIASRDAY ILPQERLNEH
RDAMEEFLHT ARFGLETLYR QVSCLDYVML LTDAKGVTVD FMGDPTYSGY LRKAGLYLGS
DWHEELAGTC AVGTCIATGE PLIVHQSDHF DASHISLTCT CAPIFDTNGD LAAALDISAL
HSPEPKLSQH LALQLVRSFT HKIENANLLN RFRGEWILKL SKAQEFLDID PEYILAVDAN
GCIIGHNSRT RELLARESRR LGDEKDRFIG EPLSAFFECD VSTLPRFARF RPSDQRTMRL
VSGGAMLFAQ AMPPPLASLP RQPATPGPNL PLPLREMFSG DPMMFEALRR AAKIVGTQMS
ILIQGETGTG KEHLAKALHA ASPRADKPFV AVNCAALPES LIESELFGYE AGSFTGAASK
GKKGLVLGAE GGTLFLDEIG DMPLASQTRL LRVLAEREVT PLGKVKPIPI DIRVIAATHR
DLVELVKAKS FREDLYFRLN GAVLTLPPLR SRIDVKWLIE RLLQRGSNRD GARRHLSDAA
LAALCAYSWP GNVRELVNCL DYASAVCSEQ QIEVEDLPES IIKSLNGAGP AALAADRAGD
ESPQSDALNG LEEALREHHW NVSAVARALA VDRSTVHRRM RRLGLVPPQK RDF
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