| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3575 |
|---|
| Symbol | |
|---|
| ID | 7092434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3934665 |
|---|
| End bp | 3937595 |
|---|
| Gene Length | 2931 bp |
|---|
| Protein Length | 976 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643466866 |
|---|
| Product | protein of unknown function DUF450 |
|---|
| Protein accession | YP_002363825 |
|---|
| Protein GI | 217979678 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG ATACCTCGGA AAAGGGACTC GAGGCCCTGA TCGTCGCTGG AATGACGGGC
CGCACCTCGG CGCCGTCCGG CGGCGGATTC TCCGAGGAGC CGGAGCCCTT CGTCGGCCTG
CATAACTGGT TGCTCGGAAA TCCGAAGGAC TATGATCGGG CATGGACGGT CGATCTTGTG
CAATTGCGCG CCTTTGTGGG CTCCACGCAA CGGCCGTTGG TGGAAGCCTT CGATCTCGAC
AACGACAGCC CGGCGCGGCA GAAATTCCTT GCCCGGCTTC AAGGCGAAAT CGGCAAGCGC
GGCGTCATCG ACGTTCTGCG CCACGGCGCG AAGCATGGCG CGCATGATGT GGACCTGTTC
TATGGCACTC CGTCCCCGGG CAACGCCAAG GCCGCCGAAC GCTTTGCGCT GAACAGGTTC
TCGGTCACGC GCCAGCTTCG CTACAGCCGT GACGATACCG CCCATGCGCT CGATCTCGCG
CTGTTCATCA ATGGCTTGCC GATCGCAACG TTCGAACTGA AGAACAGCCT GACGAAACAG
ACAGTCGAAG ACGCCGTTGA GCAATACAAA CGCGACCGCG ATCCGCGTGA GAAGCTCTTC
GAATTCGGCC GGTGTATCGT GCATCTTGCG GTGGACGACG CGCAGGTGAA GTTCTGCACC
CAGCTGAAGG GCAAGGCATC GTGGTTCCTG CCCTTCAACA AGGGCTGGAA CGATGGCGCC
GGCAACCCGC CGAATCCCAC AGGCATCAAG ACCGACTATC TTTGGAAGGA TATCCTCACG
CCGCTCAGCC TGACGGACAT CATCGAGAAC TATGCCCAGA TCGTTGAGCG CAAAGACCCG
AAGACCAACC GGACCAAGCG GGATCAGCTT TTCCCGCGCT TTCATCAGCT CGATGTGGTG
CGCAAGCTCC TCGCGGATGC GAAGGCGAAG GGCGCTGGCC GGCGCGTGCT GATCCAGCAT
TCGGCGGGAT CAGGGAAATC AAATTCAATT GCGTGGCTGG CGCACCAGCT CGTGCGGTTG
GCGAATGGCG GAGGTCAGGT CTTCGATTCC GTGGTCGTTG TAACCGACCG CCGAATTCTC
GATCAGCAAA TCCGCGACAC CATCAAGCAG TTCGCCCAAG TTGGCGCGAC GGTCGGGCAT
GCCGAGCATT CCGGCGATCT TCGCCGCTTC ATCGCCGACG GCAAGAAGAT CATCATCACC
ACGGTTCAGA AGTTCCCGTT CATCCTCGAT GACATCGGCG CGCAGCACAA AGACAGACGC
TTTGCGATCC TCATCGACGA GGCGCATTCC AGCCAGGGCG GCAAAGCGGC GGCGGCTTTG
AACGCAGCGT TGACCGGCGC GGAAGACGGC AACGAGGACG AAACCGTCGA AGACAAGATC
AATGCGATCA TGGAGCAACG GAAGATGCTC CCGAACGCAA GCTATTTCGC GTTTACAGCG
ACGCCGAAGA ACAAGACGCT TGAGATATTT GGCGAGCCGT TCCCCGAAGG CGATGTCGTC
AAACACCGCC CGTTCCACAG CTACACGATG AAGCAAGCGA TCCAGGAAGG CTTCATTCTG
GACGTGCTTC GCTATTACAC GCCCGTTAAC AGCTACTATC GGCTGGTCAA GACGGTCGAC
GAGGATCCGG AGTTCGATAC GAAACGCGCG ACAAGGAAGC TTCGCCGCTA TGTCGAGAGC
AACGACCATG CCATCAGGCT CAAGGCTGAG ATCATGGTCG ATCACTTCCA CGAGCAGGTG
CTCGCGTTGA ACAAGATCGG TGGCCAGGCG CGGGCGATGG TGGTGACTTC AGGAATCGAA
CGCGCGATCC AGTACTATCA GGCGGTGAGC GCCTATCTGG TCGAACGCAA GAGCCCTTAT
CGTGCGATCG TCGCCTTTTC GGGCGAGCAT GAATTCTGCG GAGTGAAAGT CTCCGAGGCC
AGCCTCAACG GGTTTCCCTC GAAGGATATC GTCGATCAGA TCGAAACCGA TCCGTATCGA
TTCCTGATCT GCGCCGACAA ATTTCAGACC GGGTACGACC AGCCGCTTCT GCATTCCATG
TATGTGGACA AGGCCCTGTC GGGCATCAAA GCGGTTCAGA CCCTGTCGCG TCTCAACCGC
GCACACCCCC AGAAGTACGA CACCTTCGTT CTGGATTTCA TGAACGATAC CGAGACGATC
CGCGCATCGT TCGACAAGTT CTATCGAACA ACGATCCTGA GCGACGAAAC CGATCCAAAC
CGGCTTCACG ATCTCAAGGC CACGCTGGAC GGGTATCAGG TCTACGATCC GGCCCAGATT
GACCAGCTCG TTGGTTTGTA TCTCTCGGGC GCTGATCGCG ATCAGCTCGA TCCGATCCTC
GATGCTTGCG TCACCACTTA CAACGACAGC CTCGACGAGG ACGGGCAGGT TGACTTCAAG
GGCAAAGCAA AGGCATTCGC ACGGACCTAC GCATTCATTT CCGCGATTCT TCCCTACACG
ACCGGAATGG GAAAAGCCCT CGATCTTATT GAACTTCTTG CTGCCAAAGC TGCCGGCGCC
GCGCGAGGAA GACCTCTCCA AGGGAATTCT CGAAGCCATC GATATGGACA GCTACCGCGT
GGAGAAGCAG GCCGCGCAAA GAGTGCAATT GTCCGATCAA GACGCGGAAA TCGATCCCAT
CCCAGCCGAA GGCGGCGGCC ACAAGGCCGA ACCCCAACTC AATCGGCTGT CAAATATCAT
TCGAAGCTTC AACGATCTCT TCGGCAACAT CACATGGGCG GACACCGATC GTATTCGTCG
CCTGATCGCC ATCGAGATCC CCGACAAGGT TGCGGCCAAC GCGGCCTATC AGAACGCGAA
GTTAAACTCC GACAAACAGA ACGCCCGGAT CGAACACGAC AAAGCGCTGG CTGGCGTAAT
CATCGGGCTG ATGAAGGACG ACACCGAACT GTTCAAGCAG TTCAGCGATA A
|
|---|
| Protein sequence | MKTDTSEKGL EALIVAGMTG RTSAPSGGGF SEEPEPFVGL HNWLLGNPKD YDRAWTVDLV
QLRAFVGSTQ RPLVEAFDLD NDSPARQKFL ARLQGEIGKR GVIDVLRHGA KHGAHDVDLF
YGTPSPGNAK AAERFALNRF SVTRQLRYSR DDTAHALDLA LFINGLPIAT FELKNSLTKQ
TVEDAVEQYK RDRDPREKLF EFGRCIVHLA VDDAQVKFCT QLKGKASWFL PFNKGWNDGA
GNPPNPTGIK TDYLWKDILT PLSLTDIIEN YAQIVERKDP KTNRTKRDQL FPRFHQLDVV
RKLLADAKAK GAGRRVLIQH SAGSGKSNSI AWLAHQLVRL ANGGGQVFDS VVVVTDRRIL
DQQIRDTIKQ FAQVGATVGH AEHSGDLRRF IADGKKIIIT TVQKFPFILD DIGAQHKDRR
FAILIDEAHS SQGGKAAAAL NAALTGAEDG NEDETVEDKI NAIMEQRKML PNASYFAFTA
TPKNKTLEIF GEPFPEGDVV KHRPFHSYTM KQAIQEGFIL DVLRYYTPVN SYYRLVKTVD
EDPEFDTKRA TRKLRRYVES NDHAIRLKAE IMVDHFHEQV LALNKIGGQA RAMVVTSGIE
RAIQYYQAVS AYLVERKSPY RAIVAFSGEH EFCGVKVSEA SLNGFPSKDI VDQIETDPYR
FLICADKFQT GYDQPLLHSM YVDKALSGIK AVQTLSRLNR AHPQKYDTFV LDFMNDTETI
RASFDKFYRT TILSDETDPN RLHDLKATLD GYQVYDPAQI DQLVGLYLSG ADRDQLDPIL
DACVTTYNDS LDEDGQVDFK GKAKAFARTY AFISAILPYT TGMGKALDLI ELLAAKAAGA
ARGRPLQGNS RSHRYGQLPR GEAGRAKSAI VRSRRGNRSH PSRRRRPQGR TPTQSAVKYH
SKLQRSLRQH HMGGHRSYSS PDRHRDPRQG CGQRGLSERE VKLRQTERPD RTRQSAGWRN
HRADEGRHRT VQAVQR
|
|---|
| |