Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3563 |
Symbol | sdhA |
ID | 7092421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 3923014 |
End bp | 3924852 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643466854 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002363814 |
Protein GI | 217979667 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTAG GCAGCACGTC GAACGGCGCC GCCGGACCGG CGCGGCTTGG AGCCGCTTAT CCGATCATCG ATCACAGCTT TGACGTGATC GTCGTCGGCG CCGGGGGCGC CGGCCTTCGC GCCACCGTCG GCTGCTCGCA GGCCGGACTT CGCACGGCCT GTATCAGCAA GGTCTTTCCA ACCCGCTCGC ACACGGTTGC GGCGCAGGGC GGCGTCGCCG CATCGCTCGC CAATATGGGG CCGGACAATT GGAAATGGCA CATGTACGAC ACCGTCAAGG GGTCGGACTG GCTGGGCGAT CAGGATTCGA TCGAATATCT CTGCCGCAAC GCGCCGGCCG CCGTCTATGA ACTCGAACAT TGGGGCGTGC CGTTCTCCCG CACGGAAGAC GGCCGCATCT ATCAGCGCCC ATTCGGCGGC ATGACCACCG ATTTCGGCAA GGGCCCGCCG GCGCAGCGCA CCTGCGCCGC CGCCGACCGC ACCGGCCACG CCATGCTGCA CACGCTGTAT GGCCAGGCGC TGCGCTATAA CACTGAATTC TTCATAGAAT ATTTCGCCAT CGACCTCATC ATGGAGGACG GCCGCTGCCG CGGCGTCGTC TGCCTGAAAC TCGATGACGG CACCATCCAC CGCTTCCGCG CGCAGCTCGT CATTCTCGCC ACCGGCGGCT ATGGCCGCGC CTATTTCTCG GCGACCTCAG CGCATACTTG CACCGGCGAC GGCAACGCCA TGGTTTTGCG CGCCGGACTG CCGCTGCAGG ACATGGAATT CGTGCAATTC CATCCGACTG GCATCTATGG CGCAGGCTGC CTCATCACCG AGGGCGCGCG CGGCGAAGGC GGCTATCTGA CCAATGGCGC CGGCGAGCGC TTCATGGAGC GCTACGCGCC CTCCGTCAAA GATCTCGCGC CGCGCGACAT GGTCTCACGC GCCATGACGA TGGAAATCCG CGAAGGCCGC GGCGTCGGCA AGAACAAGGA TCACATCCAC CTCCATCTCG ATCATCTCGA CCCGAAAATC CTGCATGAGC GTCTGCCCGG CATTTCCGAA AGCGCCAAGA TTTTCGCTGG CGTCGACCTC ACCAAGGCGC CGATCCCGGT GCTGCCGACG GTGCATTACA ATATGGGCGG CATCCCGACC AATTATCACG GCGAAGTCGT CATCAAGAAG GACGGCGACC CGGACGTGAT CGTGCCCGGC CTGATGGCGC TTGGCGAGGC CGCCTGCGTC TCCGTGCATG GCGCGAACCG GCTCGGCTCC AATTCGCTGA TCGATCTTGT CGTGTTCGGC CGCGCCGCCG GCATCCGCGC CGCCGAGATC GTCACCGCCG GCGCGAAACA GGCCGAATTG CCGGCCGACT CGGCCGATAA GGCGCTCGCC CGGCTCGACG GGTTGCGCTT CGCCAAGGGC TCGATCCCGA CGGCGGAGCT GCGGCTGCGC ATGCAGAAGG TGATGCAGGA CCATTGCGCC GTTTACCGCA CCGGCGAGGT TCTGGAAGAG GGCTCGAAAC GGATTCATGA GGTATGGCGA GCGAAGGATC AGGTCGGCGT CACCGACCGT TCGCTGATCT GGAATTCCGA TCTCGTCGAG ACGCTGGAAT TCGACAATCT CATCATTCAG GCCGTCGTCA CCATGGACGG CGCCGTCAAC CGCACCGAAT CGCGCGGCGC CCACGCGCGT GAAGACTACA CACAGCGCGA CGATGTGAAC TGGATGAAGC ATACGCTGGC CTCGATCGAT CCGGACGCAC ATTCGGTCTC GATCGATTAC CGCCCCGTGC ACAGCTACAC CATGACCAAT GAGATGCAGT ACATCGAGCC GAAGGCGCGG GTGTATTGA
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Protein sequence | MALGSTSNGA AGPARLGAAY PIIDHSFDVI VVGAGGAGLR ATVGCSQAGL RTACISKVFP TRSHTVAAQG GVAASLANMG PDNWKWHMYD TVKGSDWLGD QDSIEYLCRN APAAVYELEH WGVPFSRTED GRIYQRPFGG MTTDFGKGPP AQRTCAAADR TGHAMLHTLY GQALRYNTEF FIEYFAIDLI MEDGRCRGVV CLKLDDGTIH RFRAQLVILA TGGYGRAYFS ATSAHTCTGD GNAMVLRAGL PLQDMEFVQF HPTGIYGAGC LITEGARGEG GYLTNGAGER FMERYAPSVK DLAPRDMVSR AMTMEIREGR GVGKNKDHIH LHLDHLDPKI LHERLPGISE SAKIFAGVDL TKAPIPVLPT VHYNMGGIPT NYHGEVVIKK DGDPDVIVPG LMALGEAACV SVHGANRLGS NSLIDLVVFG RAAGIRAAEI VTAGAKQAEL PADSADKALA RLDGLRFAKG SIPTAELRLR MQKVMQDHCA VYRTGEVLEE GSKRIHEVWR AKDQVGVTDR SLIWNSDLVE TLEFDNLIIQ AVVTMDGAVN RTESRGAHAR EDYTQRDDVN WMKHTLASID PDAHSVSIDY RPVHSYTMTN EMQYIEPKAR VY
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