| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3550 |
|---|
| Symbol | |
|---|
| ID | 7092408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3908033 |
|---|
| End bp | 3909070 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643466841 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_002363801 |
|---|
| Protein GI | 217979654 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA CCATCAAGAC CGACGTGCTG ATCGTCGGCG CCGGGCCGGC CGGGCTTTTC
GCGGTTTTCG AGCTCGGTCT GCTGGACATC AAGTGCCATC TCGTCGACAT CCTGCCGAAG
GCTGGCGGCC AGTGCAGCGA GCTCTATCCC GAAAAGCCGA TCTACGACAT TCCGGGCTAT
CCGATCGTCA CCGGCCAGGG CCTCGTCGAC CATCTGCTGC AGCAGATTGA GCCGTTCCAT
CCGACGTTCC ATTACGGCGA GATGGTCGAG GCGATCGAAC CGCTTGGAAC GGCAGAGGCT
CCGCTCTTCA AAGTGAGTGC CACCGGCGGC AAGATATTCG AGTGCAAATC CATCATCGTC
GCGGCGGGCG GCGGCTCGTT CCAGCCCAAG AAACCCCCGA TCGAAGGCAT CGAGGCCTAT
GAGGGGAACT CCGTCTTCTA CGCCGTGCGC AAGATGGAGG ATTTCCGCGG CAGACACGTC
GTCATCGTCG GCGGCGGCGA TTCCGCGCTC GACTGGACGC TCAATCTCCA GCCGATCGTC
GAACGGCTGA CGCTGATCCA TCGCCGCGAT GATTTTCGCG GCGCGCCGCA TTCCGTCAAG
GCGATGCGCG AACTGGTCGC CAACGGCCTC ATCGATCTTC ATATCGGCCA GGTCGCCTCG
CTCGCGGGGG AGGGCGGGCA ATTGCGCGGG CTGACGCTGA AGGGCGCCGA CGGCGCCTTG
CGCGACATCG CCTGCGAGCG GCTCATCCCC TTCTTCGGCC TCACCATGAA GCTCGGGCCG
GTCGCCGAAT GGGGACTGAA CCTGCATGAA AATCTGGTTC CGGTCGACAC CGAGAAATTC
GAAACCAATG TGCCGGGGGT ATTCGCGATC GGCGACATCA ACACCTATCC CGGCAAGCTG
AAGCTGATAC TGTGCGGCTT CCATGAGGGG GCGCTGGCGG CTCAGAAAAT TCACCGCTAC
GTCTATCCGG ACAAGAAGCT GACCTTCCAG TACACGACGT CCTCAACCAA TCTGCAGAAG
AAGCTCGGAG TCCATTGA
|
|---|
| Protein sequence | MSETIKTDVL IVGAGPAGLF AVFELGLLDI KCHLVDILPK AGGQCSELYP EKPIYDIPGY
PIVTGQGLVD HLLQQIEPFH PTFHYGEMVE AIEPLGTAEA PLFKVSATGG KIFECKSIIV
AAGGGSFQPK KPPIEGIEAY EGNSVFYAVR KMEDFRGRHV VIVGGGDSAL DWTLNLQPIV
ERLTLIHRRD DFRGAPHSVK AMRELVANGL IDLHIGQVAS LAGEGGQLRG LTLKGADGAL
RDIACERLIP FFGLTMKLGP VAEWGLNLHE NLVPVDTEKF ETNVPGVFAI GDINTYPGKL
KLILCGFHEG ALAAQKIHRY VYPDKKLTFQ YTTSSTNLQK KLGVH
|
|---|
| |