Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3545 |
Symbol | metH |
ID | 7092402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3894550 |
End bp | 3898287 |
Gene Length | 3738 bp |
Protein Length | 1245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643466836 |
Product | B12-dependent methionine synthase |
Protein accession | YP_002363796 |
Protein GI | 217979649 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain [COG1410] Methionine synthase I, cobalamin-binding domain |
TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.229259 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC GCTTTGACGG AGCAGAAACC CGAGCCGCCT TCCTTGACGC TGCGCGGAAA AGAATCCTGG TGCTCGACGG CGCCATGGGG ACGATGATCC AGCAGCATAA ATTCACCGAG GAGCAGTTTC GCGGCGAGCG CTTTGCCGAT TGGCCGAGCG ATCTGCGCGG CAACAATGAT CTCTTGAGCC TGACCCAGCC GAAGGCGATC GAACAGATCC ATCGCGCCTA TATCGACGCT GGCGCCGACA TCATCGCGAC CAACACTTTC AATTCGACAA GCATCTCGCA GGCCGACTAT GGCATGCAGG AGCTTGTCTT CGAGCTTAAT CGGGAATCGG CGCGGCTGTG CCGGGTGGCC GCCGACGCCG CGGAGAAACA CGACGGCAAG CGCCGCTTTG TCGCCGGCGC GCTTGGTCCG ACGAGCCGCA CGGCCTCGAT TTCGCCGGAC GTCAACAATC CGGGCTTTCG CGCCGTCAGC TTCGATGAAT TGCGCGACGC CTATGACGAG GCCGCGCGGG CGCTGATCGA GGGCGGCGCC GACCTTCTGA TCATCGAGAC AATCTTCGAC ACGCTGAACG CCAAGGCTGC GCTCGCCGGC GTGCGCGATG CTTTCGCCAA GCTTGGCGTC GAAGCGCCGG TCATGATTTC CGGCACGATC ACCGATCTCT CCGGCCGCAC CCTGTCCGGC CAGACGCCGA CAGCCTTCTG GCATTCCCTG CGCCACGCCG ATCCTTTGAC GATCGGGCTC AACTGCGCTC TCGGCGCGCG GGAAATGCGC GCCCATCTCG CCGAACTCTC GCGCATCGCC GATACGCTCG TCTGCGCCTA TCCAAACGCC GGTCTTCCGA ACGAATTCGG CCTTTACGAC GAGAGCCCCG AATATATGGC GAGCCTTGTC GGCGAATTCG CCGACTCGGG GCTAGTCAAT GTCGTCGGCG GCTGCTGCGG CACGACGCCC GCCCATATCC ATGCGATCGC CAAACGCATC GAGGGGGTCG CGCCGCGCGA GATCCCGGAG ATCGCGCCCT TGCTGCGCCT GTCCGGCCTC GAGCCTTTCG TGCTCGCGCC TGAAATTCCC TTCGTCAATG TCGGCGAGCG CACCAATGTC ACCGGCTCGG CCAAATTCCG GAAGCTGATC AAACAGGGCG ATTTTGCCGC GGCGCTCGAC GTTGCGCGCG ATCAGGTCGC GGCCGGCGCG CAGATCATCG ACGTCAATAT GGACGAGGGC TTGCTCGACT CCGAAAAGGC GATGGTCGAA TTCCTAAATC TCATCGCCGC CGAGCCGGAC ATCGCGCGCG TGCCGGTGAT GATCGATTCC TCGAAATTCT CGGTGATCGA GGCCGGGCTG AAATGCGTGC AGGGCAAGTC GGTCGTCAAT TCGATCTCGA TGAAAGAGGG GGTCGAAAAA TTCATCGCCG ACGCCCGCAC GGTGCGCGCC TATGGCGCCG CCGTCGTCGT CATGGCTTTC GACGAGAAGG GCCAGGCCGA CACCTTTGAA CGCAAGGTCG AGATCTGCGC CAAGGCCTAT CAGATCCTGA CGCAGGAGGC TGGCTTTCCG CCCGAAGACA TCATCTTCGA TCCGAATATC TTCGCCATCG CGACGGGCAT CGAGGAACAC AATAATTACG GCGTCGACTT CATCGAGGCG ACGCGGGAGA TTCGCAAGCG CTTCCCGCTC GTGCACATTT CCGGCGGCGT CTCCAATCTA TCGTTCTCGT TTCGCGGCAA TGAGCCGGTG CGCGAGGCCA TGCACGCCGT GTTTCTCTAC CACGCCATCC AGGCCGGCAT GGATATGGGC ATCGTCAATG CGGGGCAGCT CGCGGTCTAC GCCGAGATCG AGCCGGGGCT GCGCGAGGCC TGTGAGGACG TCGTGCTCAA CCGGCGTCCC GACGCCACCG AGCGCCTGCT TGCGATCGCC GAAGGGTTTC GCGGCCATGG AGTCGAAAAA GCCGAAAGAG ACCTTGTCTG GCGCGAGCAG CCGGTCATCA AGCGGCTTGA ACATGCGTTG GTCAATGGCA TCACCGAATT TGTCGAGCTC GACGTCGAAG AGGCGCGCGC CGCATCCAAG CGCCCGCTCG ACGTGATCGA AGGCCCGCTG ATGGCCGGAA TGAATGTCGT CGGCGATCTC TTCGGCGCCG GCAAGATGTT CCTGCCGCAG GTCGTCAAAT CGGCTCGCGT GATGAAGCAG GCGGTCGCCT ATCTTCTTCC CTATATGGAC GAGGAGAAGC GCAAGAATGG CGGCTCGGAG CGCTCCACCG CCGGCAAGAT CTTGATGGCG ACGGTCAAGG GCGACGTGCA CGATATCGGC AAGAATATCG TCGGCGTCGT GCTTGCCTGC AACAATTACG AGATCATCGA TCTTGGCGTC ATGGTTCCCG CCGCGAAGAT TCTCAGCGTT GCGCGGGCGG AAAAAGTCGA CGCCATCGGC CTGTCCGGCC TTATCACGCC TTCGCTCGAC GAGATGTGCT ATGTCGCCGC CGAAATGGAG CGCGAGGGTT TCGATCTGCC CTTGTTGATT GGCGGCGCCA CAACAAGCCG CGTGCATACG GCGGTCAAGA TCCACCCCAA CTACACGCGC GGACAAACCG TCTATGTCAA TGACGCCAGC CGCGCAGTTG GCGTCGTGCA GTCGCTGCTT GGCGAGAGCG CGCGCGATGC GGCCGAGACC TTCCGCGCCG AATATGAAAA GGTGGCGGCG GCGCATCGCC GCGGCGAAGC GGAAAAGCTG CGCCTGCCGA TCGGCAAGGC GCGCGCCAAT GCGCTCAAGA TCGATTGGGA CGACTATGCG CCGCCGCGTC CGACCTTTAC CGGCTCGCGC GTGTTTCGCA GCTATGACGT CGCCGAGCTC ATCCCTTACA TCGACTGGAC GCCCTTCTTT CAGACCTGGG AGCTGCGCGG CCGCTATCCG GCCATCCTCG ACGATCCCAA ACAGGGCGAG GCGGCGCGCA GCCTCTTTGA CGACGCGCAG GCGATGCTGA AGCGCATGGT CGAGGAGCAT TGGCTCGATC CGAAGGCGGT GATCGGCTTC TGGCCGGCCA ATTCCGTGGG CGATGACATC GCGCTCTACA CAGGTGAATC GCGTTCGGAA AAACTTGCGG CCTTCCATAC TCTGCGGCAA CAGCTGACGC GCCGCGACGG AAAACCCAAC ATCGCCCTGT CGGATTTTAT CGCGCCCGCG GGCGGCAAAC CCGACTACAT CGGCGCTTTC GTCGTCACGG CGGGCGCGCA GGAAGGCAAG ATCGCCGACC GCTTCGCCAA AGCCAACGAC GACTACGGCT CGATCCTCGT CAAGGCGCTT GCCGACCGCA TCGCCGAAGC CTTGGCCGAG CGCATGCACG AGCGCGTGCG GCGCGAATTC TGGGCCTATG CGCCGGACGA GGCGATCTCC GAGGATGACC GCTTGCGCGA AGAATATCGC GGCATTCGTC CCGCGCCCGG CTATCCGGCT CAGCCCGACC ACACGGAAAA GGCGACGCTG TTCGAACTGC TGGCGGCAGA AAAACGGATT GGCGTTTCGC TGACGGAAAG CTTTGCGATG TGGCCGGGCG CCTCTGTGTC GGGGCTCTAT TTCGCGCATC CGCAGGCGCA TTATTTCGGC GTCGCCAAGA TCGAGCGCGA TCAGGTCGAG GATTACGCGC TGCGCAAGGG GATGAGCGTC GCCGAGATGG AGCGCTGGCT GGCGCCGATC CTCAACTATG ATCCGGCGAG CGTCGCGGAG GCGGCCGCGG CGGAATAG
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Protein sequence | MTHRFDGAET RAAFLDAARK RILVLDGAMG TMIQQHKFTE EQFRGERFAD WPSDLRGNND LLSLTQPKAI EQIHRAYIDA GADIIATNTF NSTSISQADY GMQELVFELN RESARLCRVA ADAAEKHDGK RRFVAGALGP TSRTASISPD VNNPGFRAVS FDELRDAYDE AARALIEGGA DLLIIETIFD TLNAKAALAG VRDAFAKLGV EAPVMISGTI TDLSGRTLSG QTPTAFWHSL RHADPLTIGL NCALGAREMR AHLAELSRIA DTLVCAYPNA GLPNEFGLYD ESPEYMASLV GEFADSGLVN VVGGCCGTTP AHIHAIAKRI EGVAPREIPE IAPLLRLSGL EPFVLAPEIP FVNVGERTNV TGSAKFRKLI KQGDFAAALD VARDQVAAGA QIIDVNMDEG LLDSEKAMVE FLNLIAAEPD IARVPVMIDS SKFSVIEAGL KCVQGKSVVN SISMKEGVEK FIADARTVRA YGAAVVVMAF DEKGQADTFE RKVEICAKAY QILTQEAGFP PEDIIFDPNI FAIATGIEEH NNYGVDFIEA TREIRKRFPL VHISGGVSNL SFSFRGNEPV REAMHAVFLY HAIQAGMDMG IVNAGQLAVY AEIEPGLREA CEDVVLNRRP DATERLLAIA EGFRGHGVEK AERDLVWREQ PVIKRLEHAL VNGITEFVEL DVEEARAASK RPLDVIEGPL MAGMNVVGDL FGAGKMFLPQ VVKSARVMKQ AVAYLLPYMD EEKRKNGGSE RSTAGKILMA TVKGDVHDIG KNIVGVVLAC NNYEIIDLGV MVPAAKILSV ARAEKVDAIG LSGLITPSLD EMCYVAAEME REGFDLPLLI GGATTSRVHT AVKIHPNYTR GQTVYVNDAS RAVGVVQSLL GESARDAAET FRAEYEKVAA AHRRGEAEKL RLPIGKARAN ALKIDWDDYA PPRPTFTGSR VFRSYDVAEL IPYIDWTPFF QTWELRGRYP AILDDPKQGE AARSLFDDAQ AMLKRMVEEH WLDPKAVIGF WPANSVGDDI ALYTGESRSE KLAAFHTLRQ QLTRRDGKPN IALSDFIAPA GGKPDYIGAF VVTAGAQEGK IADRFAKAND DYGSILVKAL ADRIAEALAE RMHERVRREF WAYAPDEAIS EDDRLREEYR GIRPAPGYPA QPDHTEKATL FELLAAEKRI GVSLTESFAM WPGASVSGLY FAHPQAHYFG VAKIERDQVE DYALRKGMSV AEMERWLAPI LNYDPASVAE AAAAE
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