Gene Msil_3498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3498 
Symbol 
ID7092522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3841443 
End bp3843065 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content58% 
IMG OID643466789 
Product40-residue YVTN family beta-propeller repeat protein 
Protein accessionYP_002363749 
Protein GI217979602 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0631028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCA TAAACCGCAG CAAGTCGGCG TTCGCATCGG TTAACGTCGT GACATTGCTC 
GCCATTGTCA TCGCGGCGTT CGGAGCGATG GCATGGCTGG AGCAGGCGTC TGCGTGGCCG
CAGCCAGTCG GGCCCTTCGC TTATGTGAAC GGCGGAGATT CCCTGTCAGT GATCGACACG
GGAACCAACA AGGTCGTCGC CAAGATCGAG CTCGGGTGCC TCCCCGCAAA TAGCCAGGTC
TCGCCGGACG GCAAGACCGT ATACGCCATA TGCCAGAAGT CTGGCAGTAA GGAAAACATC
GCGGCGATCG ATACGAGAAC CAACGCGGTT GCGGCGCGGG TGCAGGTGGC GGGAATCCCA
AACAGCATCG TGATAAGCCC AGACGGCAAA AGCGTCTATG TCGCATATAA GAAAAATGAA
TATGGACCTC TGCAGGATAA CATAGCGGTG ATCGACGCCG CCACAAACAG GGTGACGGGC
TCGATCCTGG GCCGCAATGT GGTCGCAGGG CAAGACGGCA AGCGCATCTA TGTCGGGTCC
GCCGATAGCC TTCAAGTTAT CGATACGGCA ACCGGCAAGA CGGTGACGAC AATTCCGCTC
GGCGGGGCGC CGGACAGGCT GGCCGTGACG CCAGATCAGA AGCGCGCTGT CGTCGTGCGC
AATCTCGGCC CGTACTCAGA TCTCGTTATC GTCGACCTCA ATCTCAACGT GGCGGCGGCG
GCGGTTGACC TTAGTAACTT CACCCAAACC TACGATCTCG CGATCAATCC GGATGGTCAG
CGCGTCTACG TTACCGGATG CGTGGCGGGG ATCGATATTT GTGAAATCGG CGTGATTGAT
CTGAAGATCA ATACGCTCAT TGCTTTTGTG GGTCTTCCAC GGAACGTCGC CCAGATGACC
GTGACCCCGG ACGGAAAATA CGTTTATGTT ACGGGATTTT ATGCTACTGC ATGGGGTGAG
GCTCAAGGAT TTATATCCAT CCTCGACACG CGGACGAACC TGATTACGGC CGGCAAAGCC
GTGCCGGCTG TTCCCGGCTA TGCGGCCGCG ACGCCCGATA GCAAACAGAT CTACGTGCCG
TTGTTCCCGG CGTTCGCTAC CGATTCGTCG AAAATGTGGG TCTTCAACAG CTCCAACAAC
ACGGTCGCCG CAACGCTTGT TAACCTCGCC GGCAACGTCG CCATCGTTCC AGCGCCGCCC
GGTCTGCCGT TTACCGACTA CAGGATGTCG CATCTGGAGT TTACGTATGG CGCCAAACCA
AACGAGGACG CATTCAGTTT TTATTCCAGC ACCACGCTGA ACAACGCAAG CAACGGCATT
CGTCCGGACC TCGAAGGGCT GAGGCTCGAT TTCGGCGGTT TCGTCGCGAC GGTGGCGTCT
GGGAAGTTCA AGAAACAGTC GGACGGCTCG TTTGTCTACA ATGACCGCAT CAACGGCGTC
CTCTACAACG CCTACATTAA GCCGGCGGGT GTTTCGTCCT ACGTCGTGCA TTTGCTGCAG
TCGGGCCTCA AGCTGCCGCC GCTCGCAAAT CCGGTTCAGG TGCAGCAGAC GATCGGCGAC
GATAGCGGCG TGCATGCGGT GCAGGCGATC ATCAGGCCGC CTTTGATGTC TGTCAGCCGA
TAG
 
Protein sequence
MHIINRSKSA FASVNVVTLL AIVIAAFGAM AWLEQASAWP QPVGPFAYVN GGDSLSVIDT 
GTNKVVAKIE LGCLPANSQV SPDGKTVYAI CQKSGSKENI AAIDTRTNAV AARVQVAGIP
NSIVISPDGK SVYVAYKKNE YGPLQDNIAV IDAATNRVTG SILGRNVVAG QDGKRIYVGS
ADSLQVIDTA TGKTVTTIPL GGAPDRLAVT PDQKRAVVVR NLGPYSDLVI VDLNLNVAAA
AVDLSNFTQT YDLAINPDGQ RVYVTGCVAG IDICEIGVID LKINTLIAFV GLPRNVAQMT
VTPDGKYVYV TGFYATAWGE AQGFISILDT RTNLITAGKA VPAVPGYAAA TPDSKQIYVP
LFPAFATDSS KMWVFNSSNN TVAATLVNLA GNVAIVPAPP GLPFTDYRMS HLEFTYGAKP
NEDAFSFYSS TTLNNASNGI RPDLEGLRLD FGGFVATVAS GKFKKQSDGS FVYNDRINGV
LYNAYIKPAG VSSYVVHLLQ SGLKLPPLAN PVQVQQTIGD DSGVHAVQAI IRPPLMSVSR