Gene Msil_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3488 
SymbolmurC 
ID7092512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3830173 
End bp3831579 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content65% 
IMG OID643466779 
ProductUDP-N-acetylmuramate--L-alanine ligase 
Protein accessionYP_002363739 
Protein GI217979592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTC CGCATGAACT CGGGCCGATC CATTTCATCG GCATCGGCGG TATCGGCATG 
TCGGGCATCG CCGAGGTGCT GATCAATCTC GGCTATTCCG TGCAGGGCTC CGACGCCGCC
GAGAACGCCA ATGTGCTTCG TCTTCGCCGC AAGGGCGCGA TCATCCATAT TGGCCATCGC
GCCGACAATC TTGGCGACGC CGAAGTCGTC GTGGTGTCGA CGGCGATCAA GCGCAACAAT
CCCGAGCTCG CCTATGCGCG CGAATTGCGC CTGCCGGTCG TACGCCGCGC CGAAATGCTG
GCCGAGCTGA TGCGGCTGAA GCAATGCGTC GCCATCGCCG GCACGCATGG CAAGACCACG
ACCACATCGC TCGTCGCCAC GCTGCTCGAA GCGGGCGGCT TCGACCCGAC GGTGATCAAT
GGCGGCATCA TCAACGCCTA TGGCACCAAT TCCCGGTTAG GCGCCGGCGA CTGGATGGTG
GTCGAGGCCG ACGAAAGCGA CGGCACCTTC TTAAAACTGC CGGCTGACGT CGCCATCATC
ACCAATATCG ACCCTGAACA TCTCGACCAT TTCGGCACCT TCGAGAATAT CCGCAAGGCG
TTCCGCTCCT TCGTCGAAAA CATCCCCTTT TATGGCTTCG CCGTCATGTG CCTCGATCAT
CCGACGGTGC AGGAGCTCGT CGGCCAGATC GAGGACCGGC GCGTCATCAC CTATGGCGAG
AATCCGCACG CCGACGTGCG GCTCGTCGAT ATCGACCTTG CCGGCGGCAT GTCGCGCTTT
TCGGTGGTCG TGCGCGACCG CAAGAGCGGC GGCGAAACCG TGATTGAAAA AATCCTCATG
CCGATGCCCG GCCTGCATAA TGCGCTGAAC GCCACGGCGG CCATCGCCGT CGCGCATCAG
CTCGGCATGA GCCCCGACCA GATCCGGGGC GCGCTCGCGG GGTTTGGCGG CGTCAAGCGC
CGCTTCACCC GCACCGGCGA ATGGAACGGC GCCATCGTGT TCGACGATTA CGCGCATCAT
CCGGTCGAGA TCGCCGCTGT GCTCAAAGCC GCGCGCGCCT CGACCAAGGG CCGCGTCATC
GCAATCGTGC AGCCGCATCG CTACACGCGC CTGCATTCGC TGTTCAATGA ATTCGCGGCC
TGCTTCAACG ACGCCGACGC GGTGATCGTC GCCGACGTCT ATCCGGCGGG CGAGGCGCCG
ATCGAAGGCG CCGACCGCGA CGGCCTCGTC GCTGCCATCA AGGCGCGCGG CCATCGCCTC
GCCATGCCGC TGGCCCGTCC CGCCGATCTG TCGCGGCTGG TCCGCCAGCT GGCGCGGCCC
GGCGATTACA TCGTGCTGCT CGGGGCCGGC AACATCACCC AATGGGCCTA TGCCTTGCCG
GGCGAACTCG CGGCGAGCGC GGCGTAA
 
Protein sequence
MKLPHELGPI HFIGIGGIGM SGIAEVLINL GYSVQGSDAA ENANVLRLRR KGAIIHIGHR 
ADNLGDAEVV VVSTAIKRNN PELAYARELR LPVVRRAEML AELMRLKQCV AIAGTHGKTT
TTSLVATLLE AGGFDPTVIN GGIINAYGTN SRLGAGDWMV VEADESDGTF LKLPADVAII
TNIDPEHLDH FGTFENIRKA FRSFVENIPF YGFAVMCLDH PTVQELVGQI EDRRVITYGE
NPHADVRLVD IDLAGGMSRF SVVVRDRKSG GETVIEKILM PMPGLHNALN ATAAIAVAHQ
LGMSPDQIRG ALAGFGGVKR RFTRTGEWNG AIVFDDYAHH PVEIAAVLKA ARASTKGRVI
AIVQPHRYTR LHSLFNEFAA CFNDADAVIV ADVYPAGEAP IEGADRDGLV AAIKARGHRL
AMPLARPADL SRLVRQLARP GDYIVLLGAG NITQWAYALP GELAASAA