| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3402 |
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| Symbol | |
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| ID | 7092128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3733626 |
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| End bp | 3736595 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466702 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_002363663 |
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| Protein GI | 217979516 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGGG CGACGCGCTC GGGATTCGAA GGACGGCTTC GCGCCGAGAT CGCGGGCGAC
ATTCTCTTCG ACGCGTTCAG CCGCGGCCGC TACGCGACTG ACGCATCGCA TTACCAGATG
ATCCCGCTCG GCGTGGCCGT CCCCAAAACT GTCGAAGCGG CGGTCCGGGC CTTCGCGCTG
GCGCGCGAGG AAGGCGTCCC CGTCACAGCG CGCGGCGGCG GCACCTCGCA ATGCGGACAG
ACCATCAATC GCGGCCTGGT GATCGACGGC TCAAAATATC TGCGCCGCAT TCTCTCTCTC
GACGTTGCCG GCCGCCGCTG CGTGGTCGAG CCGGGCATCG TGCTCGATGA CCTGAACCGC
CAGCTGAAAC CACACGGTCT GTGGTTTCCG GTCGATGTCT CGACAGCCTC GCGAGCGACG
ATCGGCGGCA TGACCGCGAA CAATTCCTGC GGCGGCCGCT CGCTGCGGTA TGGCACCACG
CGGGACAATG TGATCTCGAT CGAGGCGGTT CTGGCCGATG GCGCGGCGGC CCATTTCGGC
GAGACCGCCA CCGATCTTTC CGAACTGCGC GACGCCCATC TCAAACAATT CGCCGAGAAG
CTGCTGGCCA TCGGGGCGCG CGAGGCGGAT GAAGTTGCAG AGCGCTTTCC AAAGGTCCAG
CGGCGCGTCG GCGGCTATAA TATCGACGCT CTCGATCCAG CGCGCGGCCG TGTCAACTTT
GCCCACATTC TCGTCGGCTC GGAAGGCACG CTCGCCTATT CCACCGCGAT CGAACTGAAG
CTTTCGCCGC TTCTGGGGCG CCGTGCGGTC GGAGTCTGTC ATTTCGGCTC CTTCCACGCC
GCGATGAACA GCGCCCAGCA TATTGTCAAG CTGGAGCCAA TCGCCGTCGA GCTCGTCGAT
GCGACCATGA TCTCGCTGGC GAGCGAAATC CCGATGTTCC GGCCGACGCT CGACGCCGTC
GTGCGCGGCG AGCCCCAGGC CCTGCTTCTG GTCGAATTCG CCGAAGACGA CGCGGAGAAT
GTCCGGCGTC TGAAACAGCT GGGCGATCTG ATGGGTGATC TCGGCTTCGG TTTCGATCGC
GAGGGCGCGC ATTGGGGCGG CGTCGTCGAG ACGCTCGATC CGTCTCTGCA GGCGGACATC
ACGGATCTGC GCACCTCCGG CCTCAATATC ATGATGTCGA TGAAGGACGA GGCGAAGCCG
ATCTCTTTTG TTGAGGATTG CGCCGTTCCG CTGGAGCATC TTGCGGATTA CACCGAGAAG
CTCACGAGCG TCTTCGAGAA ACACGGGACG CGCGGCACCT GGTACGCGCA CGCCTCCGAA
GGCTGTCTGC ATGTGCGTCC GGTGCTCAAT CTGAGGCTCG ATAAAGACGT CAAGGCGATG
CGGGCCATCG CCGAAGAGGC GTTCGCTCTC GTGCGCGCCT ATAAGGGATC GCATTCAGGC
GAACATGGCG ACGGACTGGT GCGCAGCGAG TTCCACGAGC CGATGTTCGG CCAGAGGCTG
GTCAAAGCCT TCGAAGAGGT GAAGTCGGTT TTCGACCCGA AGGGAATCCT CAATCCGGGC
AAGATCGTGC GATCGCCGCG TTTCGACGAC CGCAGTCTGC TGCGCTACGC GCCGGGCTAT
GAGGTTCGCG ACTTTGCCCC ACAGCTCAGC TGGGCCGGAT ATCCCGGCGC CGTCGGCGGC
CTGCAAGGCG CTGTCGAGAT GTGCAACAAC AATGGCGCCT GTCGAAAACT CGAGGGGGGC
GCGATGTGCC CGTCCTATCG CGCCACACGT GACGAAAAGC ATGTGACGCG CGGACGCGCC
AACAGCCTGC GGCTGGCGCT TTCTGGTCAG CTTGGCGCCG ACGCCTTCGC CTCCGACGCC
ATGGCCGAGA CGATGAAGCT CTGCGTCTCG TGCAAAGCCT GCAAGCGCGA ATGTCCGACG
AGCGTCGACA TGGCGCGCAT GAAGATCGAG GTCATGGCGG CCCGGGCGCA AAAACATGGT
TTTTCCCTGC GCGACAGGCT CATCGCCTAT ATGCCGCGCT ATGCGCCCTT CGCAGCTCGC
CTCGCGCCTT TGCTCAATCT GCGCAATCGC AGTCCCTTTC TGCGGCGGCT GATGGAAACG
ATCGTCGGCT TCAGCGCTCG CCGCGATCTG CCGATTTGGC GGCCCGATCG ATTTTCAGCG
CGCGCGCAGA CGCTGGGGCC AGTTGACGGC CGAGAGCTTG TTCTTTGGGT GGACAGTTTC
AACGCCGCTT TCGAGCCCGA AAATATCGAG GCGGCGATCA CGACTTTGAC CGCAGCCGGC
TACCGCGTTC ATATCGCCGG CCCGATTGAC GGATCGGCGC GTCCGCTTTG CTGCGGCAGG
ACCTTTCTGT CGATTGGAAA TGTTGCGGCG GCGCGCGCGG AAATGTCTCG CACGCTGACG
GCCTTGCGTC CCTTCCTGGA GCGTGGCCTC GCCGTTGTCG GCCTGGAGCC GAGCTGTCTT
TTTTCCTTCA GAGACGAGGC GCTGGCTCTT CTGCCCGGTG AGGACGCGCG GCGCGTCGCG
GCCCACGCAA TGCTGTTCGA GGAATTCATC GTGTGCGAGG CGAAGGCGGG TCGATTTCCG
CCCGTCCTTG GTCCGGTCGG GAAGAAGGCG TTATTACATG GCCATTGTCA TCAAAAGGCC
TTCGGAGCCA TGGGCGCGGT CGAGACCGCG CTGCGCCTCG TCCCCGGTCT TACGGTCGAG
ACGATCGAGT CAAGCTGCTG TGGCATGGCG GGGGCCTTTG GTTACCAGGC GGAGACGATG
GACGTCTCTC TAGCCATGGC GGAGCTGTCT TTGCTGCCGG CGGTCCGCAA GGCTGAACTC
GACGCTCTTC TGGTGGCCGA CGGAACATCC TGTCGTCATC AGATCAGGGA CGGCGCGCCA
CGCAAGGCCG TGCATGTCGC GCGTCTCTTC GAGGCGAGCC TCAAGGCAGG GCAACGGACC
GCAACCAAGG CGAAAGCGGC AGTTCAATGA
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| Protein sequence | MVGATRSGFE GRLRAEIAGD ILFDAFSRGR YATDASHYQM IPLGVAVPKT VEAAVRAFAL
AREEGVPVTA RGGGTSQCGQ TINRGLVIDG SKYLRRILSL DVAGRRCVVE PGIVLDDLNR
QLKPHGLWFP VDVSTASRAT IGGMTANNSC GGRSLRYGTT RDNVISIEAV LADGAAAHFG
ETATDLSELR DAHLKQFAEK LLAIGAREAD EVAERFPKVQ RRVGGYNIDA LDPARGRVNF
AHILVGSEGT LAYSTAIELK LSPLLGRRAV GVCHFGSFHA AMNSAQHIVK LEPIAVELVD
ATMISLASEI PMFRPTLDAV VRGEPQALLL VEFAEDDAEN VRRLKQLGDL MGDLGFGFDR
EGAHWGGVVE TLDPSLQADI TDLRTSGLNI MMSMKDEAKP ISFVEDCAVP LEHLADYTEK
LTSVFEKHGT RGTWYAHASE GCLHVRPVLN LRLDKDVKAM RAIAEEAFAL VRAYKGSHSG
EHGDGLVRSE FHEPMFGQRL VKAFEEVKSV FDPKGILNPG KIVRSPRFDD RSLLRYAPGY
EVRDFAPQLS WAGYPGAVGG LQGAVEMCNN NGACRKLEGG AMCPSYRATR DEKHVTRGRA
NSLRLALSGQ LGADAFASDA MAETMKLCVS CKACKRECPT SVDMARMKIE VMAARAQKHG
FSLRDRLIAY MPRYAPFAAR LAPLLNLRNR SPFLRRLMET IVGFSARRDL PIWRPDRFSA
RAQTLGPVDG RELVLWVDSF NAAFEPENIE AAITTLTAAG YRVHIAGPID GSARPLCCGR
TFLSIGNVAA ARAEMSRTLT ALRPFLERGL AVVGLEPSCL FSFRDEALAL LPGEDARRVA
AHAMLFEEFI VCEAKAGRFP PVLGPVGKKA LLHGHCHQKA FGAMGAVETA LRLVPGLTVE
TIESSCCGMA GAFGYQAETM DVSLAMAELS LLPAVRKAEL DALLVADGTS CRHQIRDGAP
RKAVHVARLF EASLKAGQRT ATKAKAAVQ
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