Gene Msil_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3360 
Symbol 
ID7092086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3689900 
End bp3691159 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content67% 
IMG OID643466666 
Productesterase, PHB depolymerase family 
Protein accessionYP_002363627 
Protein GI217979480 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3509] Poly(3-hydroxybutyrate) depolymerase 
TIGRFAM ID[TIGR01840] esterase, PHB depolymerase family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.995755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT TCAGCAAGAT CGATCTGGGC GAGGTGACCC GTCTCACCAA GGCCGGTAAG 
CTCACCGAGG CCATGGGGCT CCTGCAGGGC TCCAAACTGC CCGGCACAAC GAACGACGAG
CCACATCGGA CGGCGCAAGG GCAGGCATGG CGCGCCAAGC GTTCATGGCC GACAATCGAC
ATGGCGGCTC CCTCGTCTCC AGGCGGGGCC TGGACAGCGC CGGGTTATGC CGCCGGGCCG
ATCGCTGGCG CATCCGCACC GCTCGGCAAG GCCTCCGGCT TCCCCGACGT CTCCGCGACG
ATGCAGGCGT TTCGCAGCCG TGTCGCCGGG CAGGCTTCCT TCTCCAGCCT TGGCGAAGGT
CTCGCAACCG GAGGGCAGGC GCCCCTGCCG ATGGCCGATG GCGCTCGCTT CGAGGAGCGG
ACCTACTCCA ACAGCGCGGG CAGCCGGACC TACAAGGTGT TCATCCCGAG CGGCTATGCC
GGCCAGGCTC TCCCGGTCGT GATGATGTTG CATGGCTGCA CCCAAAATCC GGACGATTTT
GCGGCCGGCA CGCGGATGAA TGATCTGGCC GAGAAAGAGA CCTTCCTGGT CGTCTATCCG
CGTCAACCGC AGTCGGCAAA CATGCAGAAG TGCTGGAACT GGTTCAAGGC CGAAGATCAG
CGCCGCGAGG GCGGTGAGCC CTCGCTGATC GCGGGCATCG CGCTGGCGGT CGTCGACGAA
TTTTCGGCCG ACCCGACCCG GGTCTACGTG GCGGGTCTCT CGGCCGGGGG CGCCGCCGCC
GCCATCATGG GAGCGACCTA TCCCGACCTG TTTGCCGCGG TCGGCGTGCA TTCGGGACTA
GCCTGCGGCG CCGCCAAGGA CATGCCATCG GCTTTCGCCG CTATGAACGG AGGCGGCGTG
ACCCGCGCGC GGGGTGACGG GCCCGCGGCG CCAACCATCG TATTTCACGG CGACAGTGAT
CGAACGGTCA ACCTGGTCAA TGGGGATCAG GTCATTGCCC AGGCGAGGCC GCAAACAACC
TTGGCCACAG CAGTAACTCG CGGCGAGGCG CAGGGCGGAA TGGCCTATAC CCGCACGGTG
CATTCCAACG ATGCCGGACA GGAGGTCCTC GAGCAGTGGG TCCTGCACGG CGCAGGCCAT
GCGTGGTCCG GCGGTAGCGC GAGCGGTTCT TACACGGATC CGCGCGGTCC TGACGCCAGT
CGGGAAATGC TGCGCTTCTT CCTGGCGCAG GTGAGCACGA AGGCCACGAC CCGACACTAG
 
Protein sequence
MNAFSKIDLG EVTRLTKAGK LTEAMGLLQG SKLPGTTNDE PHRTAQGQAW RAKRSWPTID 
MAAPSSPGGA WTAPGYAAGP IAGASAPLGK ASGFPDVSAT MQAFRSRVAG QASFSSLGEG
LATGGQAPLP MADGARFEER TYSNSAGSRT YKVFIPSGYA GQALPVVMML HGCTQNPDDF
AAGTRMNDLA EKETFLVVYP RQPQSANMQK CWNWFKAEDQ RREGGEPSLI AGIALAVVDE
FSADPTRVYV AGLSAGGAAA AIMGATYPDL FAAVGVHSGL ACGAAKDMPS AFAAMNGGGV
TRARGDGPAA PTIVFHGDSD RTVNLVNGDQ VIAQARPQTT LATAVTRGEA QGGMAYTRTV
HSNDAGQEVL EQWVLHGAGH AWSGGSASGS YTDPRGPDAS REMLRFFLAQ VSTKATTRH