| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_3239 |
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| Symbol | |
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| ID | 7090654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3553351 |
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| End bp | 3554349 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466547 |
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| Product | hopanoid-associated sugar epimerase |
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| Protein accession | YP_002363508 |
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| Protein GI | 217979361 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | [TIGR03466] hopanoid-associated sugar epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.109011 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGCGG ACACGGTTCT GGTCACAGGA GCTTCGGGCT TCGTCGGATC GGCGGTCGCG
CGCGCGTTGA CGCATTCGGG CTATAGCGTC AGGGCGCTGC TGCGGCCGAC GGCGACGCGT
GAGAATCTGT ACGGGCTCGA TGCCGAAATC GTCGAAGGCG ACATGTGCGA AATGCGCTCG
GTCGAAAAGG CGATGGCCGG CGCGCGCTTT CTTTTTCATG TCGCGGCCGA CTATCGTCTC
TGGGCGCGCG ATCCCGGCGA AATCGTGCGC ACCAACCGCG ACGGCACGCG CGTTCTGATG
CAGGCGGCTC TGCGCGAAGG CGTCGAACGG ATCGTCTATA CGAGCAGCGT GGCGACGATC
GCCTGCCGGG ACAATGGCGC GCCCGCGGAT GAATCCAGCT CGCTCGCCGA ATGCAACGCC
GTCGGCGCCT ATAAGCGCAG CAAGGTGCTG GCGGAGCAGA TCGTCAAAGA CATGATCGTG
CGGGATCAAC TGCCGGCGAT CATCGTCCAT CCCTCGACGC CGGTCGGCCC CCGCGACGTC
AGGCCGACGC CGACCGGGCG CATCATTCTC GAGGCGGCGA TGGGCCGCAT GCCGGGCTAT
GTCGACACCG GCCTCAATCT CGTCCATGTC GACGACGTGG CTTCGGGTCA TGTCGCAGCG
CTGCGCCGCG GCAAGATCGG CGAACGCTAT ATTCTGGGCG GGCAGGACGT GCCGCTCGCC
GGCATGTTGA GGGATATTGC CGAGCTTTGC GGGCGCCATC CGCCGTGGCT GCGGCTGCCG
CGCGCGCTCG TCTATCCCTT CGCCCTTGCC GCCGAGGCGG CGGCGCATCT CACCCACAAA
GAACCCTTCG TGACGATCGA CGGTCTGCGC ATGTCGCGCC ACACCATGTT CTTCAGCTCG
GCCAAGGCCG AGCGTTGCCT TGGCTATGTG GCGCGGCCCT ATCGCGAAGC GCTGAACGAC
GCCCTGAACT GGTTCACCGA AAACGGACGG CTGAAATGA
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| Protein sequence | MTADTVLVTG ASGFVGSAVA RALTHSGYSV RALLRPTATR ENLYGLDAEI VEGDMCEMRS
VEKAMAGARF LFHVAADYRL WARDPGEIVR TNRDGTRVLM QAALREGVER IVYTSSVATI
ACRDNGAPAD ESSSLAECNA VGAYKRSKVL AEQIVKDMIV RDQLPAIIVH PSTPVGPRDV
RPTPTGRIIL EAAMGRMPGY VDTGLNLVHV DDVASGHVAA LRRGKIGERY ILGGQDVPLA
GMLRDIAELC GRHPPWLRLP RALVYPFALA AEAAAHLTHK EPFVTIDGLR MSRHTMFFSS
AKAERCLGYV ARPYREALND ALNWFTENGR LK
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