Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3222 |
Symbol | |
ID | 7090637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3534734 |
End bp | 3535930 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643466530 |
Product | DNA replication and repair protein RecF |
Protein accession | YP_002363491 |
Protein GI | 217979344 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.000505165 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCAGACTG AAGCCCTCGC AACCGAATCG TCGCCCGCGC CGCCGGCCAA ACAGGCGCGG CGGGGCGTCC GGCGTCTGAC GCTGGCCGAT TTCCGCTCCT ATGCCTCGCT CGACATGGAA ATCCTGGCGC AGACGGTCGT GCTCACCGGC GACAATGGCG CCGGCAAGAC GAATGTGCTC GAGGCCCTGT CGCTGCTGAC CCCCGGCCGG GGTCTGCGGC GCGCCGAGCT TTCCGATTGC GCGCGGAATT TTGGCGGCGG AGGCTTCGCC GTCTCGATCG AAATCGACGC CGAGGGCGGA CGGCTGCAGC TTGGGACCGG CGTCGAGCCG AACGGCGGAG CGGCGCTGGC GCGCAAATTT CGCATCGATC GCGAGCCGGC TCCTTCGATC CGGGCCTTTT GCGACCATAT TCGCGTCGTC TGGCTGACGC CCGCCATGGA TGGGCTTTTT GTCGGCTCTC CCGGCGACCG CCGGCGCTTC CTCGACAGGC TGGTGCTGTC GCTCGACGCG GATCATGGCG CGCGGGTCAA TGCGCTGGAG CGCGCGCTGC GCAGCCGCAA CCGGCTGCTT GAAGAGCGCG GCGCCGGCAA TGAGCGGCTC TGGCTCGACG CGGTGGAGCG CGAGGTCGCC GAGCTTGCGA TCGCCGTGGC TGCCGCGCGC TTCGAGACGG TCAGCAAGCT CGCAGCCCTG ATCGCCCAGG CCGGCCCGGA GACGGAGGGC GGCTTTCCGC TCGCGGAGCT GAGCCTCGAT GGCGATATCG ATCGTCTGAT CGAGACGCGG CCGGCGCTTG AGGCCGAGGA CGAATATCGC AAAATCCTGC GCGACAACCG CGGCCGCGAC GCCGCCGCGG GCCGCACGCT GATCGGCCCG CAATCGAGCG ATCTTGCCGT TCGGCACGCG CGCAAACAGG CTGCGGCGTC GCACAGTTCG ACCGGCGAGC AGAAAGCTCT GCTGGTCGGG CTGATTCTGG CGCAGGCGCG CCTCATCAAG GCGATGAGCG GGCTGGCGCC GCTGGTGCTC CTCGACGAGA TCGCCGCCCA TTTCGATCCG AAGCGCCGCG CGGCGCTCTA TGAGCTGCTC GGCGCGCTTG GCGCTCAGGT CTGGCTGACC GGGGCGGACC CCAGCGCTTT CGCCGAGCTC GAAGGCAAGG CGCAAATGCT GCAGGTCACG CCCGGCGCGA TCCGTGAGCT GCATTGA
|
Protein sequence | MQTEALATES SPAPPAKQAR RGVRRLTLAD FRSYASLDME ILAQTVVLTG DNGAGKTNVL EALSLLTPGR GLRRAELSDC ARNFGGGGFA VSIEIDAEGG RLQLGTGVEP NGGAALARKF RIDREPAPSI RAFCDHIRVV WLTPAMDGLF VGSPGDRRRF LDRLVLSLDA DHGARVNALE RALRSRNRLL EERGAGNERL WLDAVEREVA ELAIAVAAAR FETVSKLAAL IAQAGPETEG GFPLAELSLD GDIDRLIETR PALEAEDEYR KILRDNRGRD AAAGRTLIGP QSSDLAVRHA RKQAAASHSS TGEQKALLVG LILAQARLIK AMSGLAPLVL LDEIAAHFDP KRRAALYELL GALGAQVWLT GADPSAFAEL EGKAQMLQVT PGAIRELH
|
| |