Gene Msil_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_3220 
Symbol 
ID7090635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3532206 
End bp3533732 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content65% 
IMG OID643466528 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002363489 
Protein GI217979342 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG1251] NAD(P)H-nitrite reductase
[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.00102574 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACGA ACGAAACCAC AAAAGGCGAC GGCGGACGGC TTGATTTCAA CCATGGGGTG 
GACATAGAGG CCCTGCGGGA CGGCCAATTG ATAGAGGGCG AATATAGCGG AAAGACAATC
CTCGTGCTGC GCCGCGGCGA AGATATCCGG GTCTTTCGTG GAACATGCAC CCATCTTGGC
GCGCCGCTCA GCGAAGGCTT GCTCTCCGGC GATCGCCTGC GTTGCCCCTG GCACCAAGCC
TGTTTCGACA TAAAAACCGG CGAGGCGACC GCCGCGCCCG CCTTTGCGGC CCTGAAGCGC
TTTGACGTGC GCCGCGAGGG AGAAATGATC CATCTTGAAG CTCCGCAACC CGCCGCGCCT
GTCCAAGAGA ATGCTTCCGG GGTCTTCGTC ATTATCGGCG GCGGCGCGGC CGGATTCGCA
GCGGCTGATA TGCTGTGCCG CCACAGCGCC GGGAGGGGCG TCACTCTGGT CTCCGAAGAT
CAGTCGCCGC CCTATGAACG CACTTTGCTC ACCAAGGATT TTCTCGACGG CTCATGGGAC
GATCCGCGCA TCAATCTTGG CGCGGAGCCG CTCGACCGGC GCGGCGTTAC GCTGCAACTC
GGCGCGAAGG TCGCGCGCGT CGACAGGGAC CGCCATGTCG TCCGGCTCGA CGATGGACGC
GAGCTTTCCT ACCAGAAGCT GCTGCTCGCG CCGGGGGCGG CGCCGCGCTG GCCGGATTTT
CCCGGCGCGC GCCTGCCGCA GACGCATGTG CTGCGCACCC TCGCCGATTG CCAGGCGATC
GTCGCCGCCG CCAAAGAGGC GCGCCGCGTC GTCATTCTCG GATCGAGCTT TATCGGCCTT
GAGGCGGCGG CGAGCCTGCG CGCGCGCGGC CTTGAGGTCG ATGTCGTCAG TCAGGATACG
GCGCCGATGC AGCGCGTATT CGGACCCGAA ATCTCGACGG CCATGGTCGC GACGCATCGA
AAGAACGGCG TGCGCCTGCA TCTTGGACGT CAAATCAAGA ATTTCGACGG CGCGGCGGCG
ACGCTCGATG ACGGCGCCAA CCTTCCCGCC GATTTTCTTC TCATCGGCAT CGGCGTCACG
CCGCGGCTCG ATCTCGCCGA AGAGGCAGGG CTTACCGTCG AAAAGGGCGT CGTCGTCGAC
CAGTTCCTGA CGACGAGCGA CCCCGACATC TTCGCCGCCG GCGATGTCGC GGCATGGCCC
GATCCGCACA GCGGTCAGCG GCTGCGCGTC GAACATTGGA ACGTTGCAGT GCGGCAGGGC
CAAGTGGCGG CGCAAAACAT GCTCGGCGGC GAAATCCCCT ATCGCGACGT CCCGTTCTTC
TGGACGCGGC AGTTCGATTT TTCGCCGCTC TATCTCGGCC ATGCGACGGA ATGGGACGAG
ATCAAAATCG ACGGCGACAT CGAGCGCCGC GACTGCGCCG TTCGCTATAT TCGCGCCGGC
CGCGTGATGG CCAGCGTGAT GATCGGACGC GAGCGCGAAT GCCTCGAAGA GCGGGAGCGG
ATGGAGCGCG CGCTTGCAGG AAGCTGA
 
Protein sequence
MATNETTKGD GGRLDFNHGV DIEALRDGQL IEGEYSGKTI LVLRRGEDIR VFRGTCTHLG 
APLSEGLLSG DRLRCPWHQA CFDIKTGEAT AAPAFAALKR FDVRREGEMI HLEAPQPAAP
VQENASGVFV IIGGGAAGFA AADMLCRHSA GRGVTLVSED QSPPYERTLL TKDFLDGSWD
DPRINLGAEP LDRRGVTLQL GAKVARVDRD RHVVRLDDGR ELSYQKLLLA PGAAPRWPDF
PGARLPQTHV LRTLADCQAI VAAAKEARRV VILGSSFIGL EAAASLRARG LEVDVVSQDT
APMQRVFGPE ISTAMVATHR KNGVRLHLGR QIKNFDGAAA TLDDGANLPA DFLLIGIGVT
PRLDLAEEAG LTVEKGVVVD QFLTTSDPDI FAAGDVAAWP DPHSGQRLRV EHWNVAVRQG
QVAAQNMLGG EIPYRDVPFF WTRQFDFSPL YLGHATEWDE IKIDGDIERR DCAVRYIRAG
RVMASVMIGR ERECLEERER MERALAGS