Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_3029 |
Symbol | |
ID | 7092706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 3342841 |
End bp | 3344658 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643466339 |
Product | GTP-binding protein TypA |
Protein accession | YP_002363301 |
Protein GI | 217979154 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC GCAATATCGC TATCATCGCT CACGTTGACC ACGGCAAGAC GACTCTCGTC GACCGTCTGC TGCAACAGTC CGGCTCCTTC CGGGAAAACC AGCGCGTCGC CGAACGCGTC ATGGATTCGA ACGATCTCGA AAAAGAGCGC GGCATCACGA TCATGGCCAA GGCGACGTCG ATCGCTTGGG AAGGCGCGCG CATCAATATT GTCGATACGC CCGGCCATGC CGATTTCGGC GGCGAGGTGG AGCGCATTCT GTCGATGGTC GATGGCGCGA TTGTGCTCGT CGACGCCTCT GAAGGGCCGA TGCCGCAGAC CAAATTCGTG GTCGGCAAGG CGCTGAAAAT CGGCTTGAAG CCGATCGTCG CCGTCAACAA GGTGGATAAG CCCGACGCCC GCATCACGGA AGTGGTCAAT GAGGTATTCG ATCTTTTCGC CGCGCTTGAC GCTACCGACG AACAGCTCGA TTTTCCGATT CTCTATGGTT CGGCCAAGCA GGGCTGGATG GCCGACAGTC CCGACGGGCC GAAAGACGGC ATGGCGCCGC TGTTCGATCT TGTCTTGAAG CATGTTCCGG AGCCCCGCGT CGAAGAGGGC GGTTTCCGCA TGCTCGGCAC GCTGCTCGAG GCCAATCCCT ATCTCGGCCG CCTTGTGACC GGGCGCGTCT TTGCCGGCTC GATCAAGCCC AATCAGGCCG TCAAGGTGCT GGACCGTAAG GGCAATGTCG TCGAGCAGGG CCGCGTCTCC AAGATTCTCG CCTTCCGCGG CATCGAGCGG ACGCCCATCG ATGAAGCCGA AGCGGGCGAT ATTATCGCCA TCGCGGGGCT CGAAAAATTC AACGTCGCCG ACACGCTGTG CGCGCCGGAA GTCACCGAGC CGCTGCAGGC GCAGCCGATC GATCCGCCGA CCCTGTCGAT GACCTTCTCG GTCAATGATT CGCCGCTTGC CGGCACCGAA GGCGACAAGG TCACGAGCCG GGTCATCCGC GCGCGCCTCT ATAAGGAGGC CGAAGGCAAT GTCGCGCTGA AGATCGAGGA TTCGCCTGGA TCGGATTCCT ACATCGTCTC GGGGCGCGGC GAATTGCAGC TCTCGATCCT GATCGAGACT ATGCGCCGCG AGGGCTTCGA GCTCAGCGTG TCGCGGCCGA AAGTTGTGTT CCAGAAGGCG GAAGACGGCT CCATTCTGGA GCCCATCGAA GAGGTGGTGA TCGACGTCGA CGAGGAGCAT TCCGGCGTCG TCGTGCAGAA GATGGCCGAG CGCAAGGCCG AGATGATCGA GATGCGCCCC TCCGGCGGCA ACCGCTTGCG GCTCGTGTTT CACGCGCCGA CGCGCGGCCT GATCGGCTAT CAGGGAGAGC TTCTGACGGA CACGCGCGGC ACCGCGATCA TGAACCGGCT GTTTCATGAA TATGCGCCGT GGAAGGGCGA GATCGCCGGC CGACGCAACG GCGTCCTCAT CTCCAACGAC ACCGGCGAAT CCGTCGCTTA CGCCATGTGG AAGCTGGAAG ATCGCGGCCC GATGATGATC GAGCCCGGCT GGAAGGTCTA TCGCGGCATG ATCGTCGGCG AGCATACGCG CGAAAACGAT CTCGAAATCA ATGTGCTGAA GGGCAAGCAG CTGACCAATA TCCGCGCCGC CGGCAAGGAT GAGGCCGTGC GCCTGACGCC GCCGATCAAG ATGACGCTTG AGCGCGCGCT GGCCTATATC GAGGAGGACG AACTCGTCGA AGTGACGCCG AAGTCGATCC GGCTGCGCAA GCTGTTCCTT GATCCGAACG ACCGCAAACG CGCGGTCCGG ACCAAGGAAA GCGCCTGA
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Protein sequence | MKLRNIAIIA HVDHGKTTLV DRLLQQSGSF RENQRVAERV MDSNDLEKER GITIMAKATS IAWEGARINI VDTPGHADFG GEVERILSMV DGAIVLVDAS EGPMPQTKFV VGKALKIGLK PIVAVNKVDK PDARITEVVN EVFDLFAALD ATDEQLDFPI LYGSAKQGWM ADSPDGPKDG MAPLFDLVLK HVPEPRVEEG GFRMLGTLLE ANPYLGRLVT GRVFAGSIKP NQAVKVLDRK GNVVEQGRVS KILAFRGIER TPIDEAEAGD IIAIAGLEKF NVADTLCAPE VTEPLQAQPI DPPTLSMTFS VNDSPLAGTE GDKVTSRVIR ARLYKEAEGN VALKIEDSPG SDSYIVSGRG ELQLSILIET MRREGFELSV SRPKVVFQKA EDGSILEPIE EVVIDVDEEH SGVVVQKMAE RKAEMIEMRP SGGNRLRLVF HAPTRGLIGY QGELLTDTRG TAIMNRLFHE YAPWKGEIAG RRNGVLISND TGESVAYAMW KLEDRGPMMI EPGWKVYRGM IVGEHTREND LEINVLKGKQ LTNIRAAGKD EAVRLTPPIK MTLERALAYI EEDELVEVTP KSIRLRKLFL DPNDRKRAVR TKESA
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