| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2855 |
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| Symbol | |
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| ID | 7093018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3139019 |
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| End bp | 3140617 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643466165 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_002363134 |
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| Protein GI | 217978987 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.20247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGTT TCGCGACCTG GAAAATTGTC TCGATCGTGA TGATGACCGT CATCGCGCTG
CTCCTCATCG TGCCGAGCTT GCTCGGGCCG CAGAGCCGCG CGGCGCTGAT GGCGCATGCG
CCGAGCTTCC TGCCGATCCG GCCGATCGTC CTCGGCCTCG ACCTGCAGGG CGGCTCGCAT
GTCTTGCTCG AAGTCGACGG CCAGTCGGTC GTCAAGACGC TGATCGACAA TCTGCGCGAC
AGCGTCCGCC GCACCCTGCG CGAAGAGAAG GCCTCGATCT CCGGCGGCAT TGGCGTGCTG
CCGCGCGGCG TGCAGCTGCG CATTCCGGAC GCCGCCGAGC GCGAGCGGAT CATGCCGAAG
CTGCGCCTGC TTACGGCTCC GGCGAGCGCC GGCATTTCCG GCGTCGGCGG CGCGTCGGTC
TTCGACGTCA CGGAGACGGC CGACGGCCTC ATCCAGTTCA CAGTGACCGA GGCGGGGATC
AAGGCCAAGA TGCGCCGGGC GGTCGAACAG TCGATCGAGG TTTTGCGCCG GCGCGTCGAC
GCCCTTGGCA CCACCGAACC GAATATCCAG CGCCAGGGCG ACGACCGCGT GCTGGTCGAA
GTGCCGGGCC TGCAGGATAC TGGAAAACTC AAGGAAATCC TCGGCACGAC TGCGAAGCTT
GAGTTTCGTC TCGTTTCCGA CACCGGCGCC GACCCCGCCG AGACGGAAAT GCTCGAAGAG
GTCGAACGGC CGGGCTCGAA GCTTCCCGTG CAGAAGCGCG TGATGGTGCA GGGCGAGGAT
CTGACCGACG CCCAGCCCGG CTTCGACCAG CGCACGCAGG AGCCCGTCGT CAATTTCCGC
TTCAATATTC GCGGCGGCCA GCGCTTCGGC GAGGTCACTT CCGAAAATGT CGGGCGCCCC
TTCGCCATCG TGCTCGATGG CAAGGTGATT TCGGCGCCGC GCATTCTCGG GCCGATTACC
GGCGGCTCCG GGCAGATCTC GGGCCACTTC ACCGTGGAAT CCGCCAATAA TCTCGCGATC
CTGCTGCGCG CCGGCGCGCT TCCGGCCAAG CTCACCATCG TCGAGGAGCG CACGGTCGGG
CCGGGCCTTG GCCAGGATTC AATCGACGCC GGCAAGCGCG CGGCCTATGT CGGCGCGGCG
CTGGTCGCTT GCTATATGCT GATCACCTAC GGGATTTTCG GCGTCTTCGC CAACATCGCG
CTGTTCGTTC ACATCGCTTT CATTTTTGCG GGTCTCGTGT TGCTTGGCGC GACGCTGACG
CTTCCCGGCA TCGCCGGCAT CGTTCTCACC ATCGGCATGG CGGTCGATTC CAATGTGCTG
ATCTATGAGC GCATCCGCGA GGAATCGCAT GCCGGCCGCT CGATCGTCTC CTCGCTCGAC
GCCGGCTTCA AGCGCGCCTT CGCGACCATC GTCGATTCCA ACGTCACCAT GTTCGTCGCC
GCCGCGATCC TGTATTTTCT GGGATCTGGC CCGGTGCGCG GCTTCGCCGT GTCGCTCGCG
CTCGGCATTT TAACGACCAT CGTGACGGCG GTGACCATGA CGCGCATGAT GATCACGCTG
TGGTATCGCT ACAAGCGGCC GGTCAAGCTG CCGATTTGA
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| Protein sequence | MLRFATWKIV SIVMMTVIAL LLIVPSLLGP QSRAALMAHA PSFLPIRPIV LGLDLQGGSH
VLLEVDGQSV VKTLIDNLRD SVRRTLREEK ASISGGIGVL PRGVQLRIPD AAERERIMPK
LRLLTAPASA GISGVGGASV FDVTETADGL IQFTVTEAGI KAKMRRAVEQ SIEVLRRRVD
ALGTTEPNIQ RQGDDRVLVE VPGLQDTGKL KEILGTTAKL EFRLVSDTGA DPAETEMLEE
VERPGSKLPV QKRVMVQGED LTDAQPGFDQ RTQEPVVNFR FNIRGGQRFG EVTSENVGRP
FAIVLDGKVI SAPRILGPIT GGSGQISGHF TVESANNLAI LLRAGALPAK LTIVEERTVG
PGLGQDSIDA GKRAAYVGAA LVACYMLITY GIFGVFANIA LFVHIAFIFA GLVLLGATLT
LPGIAGIVLT IGMAVDSNVL IYERIREESH AGRSIVSSLD AGFKRAFATI VDSNVTMFVA
AAILYFLGSG PVRGFAVSLA LGILTTIVTA VTMTRMMITL WYRYKRPVKL PI
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