| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2851 |
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| Symbol | |
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| ID | 7093014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 3135501 |
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| End bp | 3136508 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643466161 |
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| Product | TIM-barrel protein, yjbN family |
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| Protein accession | YP_002363130 |
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| Protein GI | 217978983 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0981805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAT ATCAAGCATA TAGATTTTCC GTGGCGCCTA TGATGGACTG GACGGACCGG
CATTGCCGGT CTTTCCATCG TCTTCTGACC CGTCGTGCGC GGCTGTATAC GGAAATGGTG
ACGACGGGCG CGGTCCTGCA CGGCCAGCGC GACCGGCTGC TTGGGTTCGA CGCGGCGGAG
CATCCCCTCG CTGCGCAGCT TGGCGGGTCG GATCCCGCCG ATCTTGCGGC CGCCGCGCGC
ATCTGCGCCG ATTTCGGCTA TGACGAAATA AACCTCAATG CGGGCTGCCC GTCGAAGCGC
GTGCAGAACG GCGCCTTCGG GGCCTGCCTC ATGCGCGAGC CGGAGCTCGT TGGCGACTGC
GTCGCCGCGA TGAAGGCGGC CGTGTCCGCG CCCGTCACGG TCAAATGCCG CATCGGCGTC
GACGAGCAGG AGCCGCGCGA GGCGCTGTTC GCCTTCGCGG AAACGGTGCT CGGAGCCGGC
GCCGACGCCC TGATCGTCCA TGCGCGCAAA GCCTGGCTGG AAGGCCTCTC GCCGAAAGAC
AACCGTCATA TCCCGCCGCT CGATTATGCG CTGGTCCATG AGCTGAAGCG GCGTTTCCCC
GATACGCCGA TCGCCATCAA TGGCGGGCTC GATACGATCG ACGCCATGCG CGCCCAACTG
GATCATGTCG ACGGCGTGAT GATCGGGCGC GCCGCCTATC AGGATCCCGC GCTGCTGCTT
GAGGTCGATC CGGTCTTCTT CGGCGAGGAC GCCCCCTTCT CAGAGATGGC GCAGGCGATC
GAGGCTTTTA CGCCCTATAT CGCGGCGCGG CTGACGGAAG GAGTTCCGCT CAACGCCATG
GTCCGGCATC TGCTCGGCGC TTTTAATGGC CGGCCGGGGG CGCGCGCCTT CCGCCGGCAT
CTGGCGACGG AATCCGTCAA GCCCGGCGCC GGGCTTGAGG TCCTGCGCGC GGCGCTGGCG
CTGATTGGCT CGAGAGCGGG CGAGGATCAG GCAGAGGCGG CGGAATAG
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| Protein sequence | MKQYQAYRFS VAPMMDWTDR HCRSFHRLLT RRARLYTEMV TTGAVLHGQR DRLLGFDAAE
HPLAAQLGGS DPADLAAAAR ICADFGYDEI NLNAGCPSKR VQNGAFGACL MREPELVGDC
VAAMKAAVSA PVTVKCRIGV DEQEPREALF AFAETVLGAG ADALIVHARK AWLEGLSPKD
NRHIPPLDYA LVHELKRRFP DTPIAINGGL DTIDAMRAQL DHVDGVMIGR AAYQDPALLL
EVDPVFFGED APFSEMAQAI EAFTPYIAAR LTEGVPLNAM VRHLLGAFNG RPGARAFRRH
LATESVKPGA GLEVLRAALA LIGSRAGEDQ AEAAE
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