| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2749 |
|---|
| Symbol | |
|---|
| ID | 7092202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 3026065 |
|---|
| End bp | 3026637 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643466062 |
|---|
| Product | Hydrogen dehydrogenase |
|---|
| Protein accession | YP_002363032 |
|---|
| Protein GI | 217978885 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1941] Coenzyme F420-reducing hydrogenase, gamma subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCC CCTCGGCCGA AAGCCACGCC TCGGCAAAAC CGAGGCTAGC CACCTGCTCC
CTGACGGGCT GTTTCGGATG CCACATGTCG CTCCTCGACA TCGACGAGCG CATCCTCGAG
TTGATCGATC TCGTCGATCT CGACGTCTCG CCCTTCGACG ACAAAAAGTC GTTCGACCGG
CCGGTCGACG TCGGTTTCGT CGAGGGCGGA TGCTCGAACG AATACAACGT CAAGGAACTC
ATAGAATTCC GAAAGCATTG CCGCATCCTG GTGTCAGTCG GCGCCTGCGC GATCAACGGC
GGCGTGCCGG CGATGCGCAA CACGGTCGGA CTCCGCGAGT GCCTGGAGGC GGTCTATCTC
CATGGGGTCT CCCTCGAAGG CGGCGGCATG ATCCCGAACG ACGAAGATCT GCCGCTGCTC
CTGGATCGCG TCTACCCGTC GCATGAGGTG GTGAAGATCG ACTATTTCCT GCCGGGTTGC
CCGCCCTCCG GCGACGCCAT CTGGGCGGCG CTCAAGGCCC TGCTCACCGG GACGGAGCCG
GCGCTGTCCT ACCAACTGCT GAAATACGAA TGA
|
|---|
| Protein sequence | MKVPSAESHA SAKPRLATCS LTGCFGCHMS LLDIDERILE LIDLVDLDVS PFDDKKSFDR
PVDVGFVEGG CSNEYNVKEL IEFRKHCRIL VSVGACAING GVPAMRNTVG LRECLEAVYL
HGVSLEGGGM IPNDEDLPLL LDRVYPSHEV VKIDYFLPGC PPSGDAIWAA LKALLTGTEP
ALSYQLLKYE
|
|---|
| |