| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2665 |
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| Symbol | |
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| ID | 7091134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2915269 |
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| End bp | 2916993 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643465979 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_002362949 |
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| Protein GI | 217978802 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCC GCACGTTCCT TGTCGGCTGT GGCGCGCTGG AAGCCATGCT GGCCGGCGCA
TTCCCGGCCC GGGCGCAGAC CCCGGCGCCC ATCGTGCCCT TTAATATCGG CGACGCTGTG
CGCGAGAGCG AACAGTCGCG GCGGCCTCCG CTGCCGGCCC CGGCCGCCGC GCCCGTGCTG
CCGCAGCTTG TCGAGCCGCA ATTTACGATG AAGGACAAGG AGACGCTGTT TGTCCGCAGC
ATCGAGATCG AGGGTCCAGA CCTCGGCGCC GGCGCTGAGG CGCGCGAGCT GATCGCGCCC
TACGAGAACC GCACATTGCA GCTTGGCGAG ATCTACGGGC TCGCGGACCA GCTCACGACG
CTCTACCGCA CGAAGGGCTA TCTCGTCGCC AAAGCCTATA TCCCGGCCCA GGACGCGCGC
AGCGGCGCGC TGCGGATCAA GCTCGTTCCC GGCCTCTATG GAACTATCAC GATCAAGAAC
GACTCGCTCG TCCGGGACGA TTATCTGCGC GGCGTGATCG ACCAGGCGCT CGCCGGCTCG
CCGGTCATCC AGAAGGACCC GCTCGAGCGC GCGATGCTGT TGATTTCCGA TCTCCCGGGC
GCCGGCATGC CGCGGGTCGC GATCGGGCCG GGGCAACAGC CGGAGACGTC GGATTTCGTG
TTCAGCGCGC CGGAGGCGCG CCGCCTCGAC GGCTATCTGC TCGGCGATAA TTTCGGGTCG
CCCTTCACCG GCCGGGACAG GCTGAGCGGC GGCCTCAATC TGAATTCTCC GCTCGGCTAT
GGGGACCGCC TCTCGGCGTT CGGCATCGTC TCGGAGCGGG CCGGCCTCGT GAACGGGCGC
GCGTCCTATT CCTTTCCAAT CTTCTACGAT GGGCTGCGCG CCGAAATCGG CGCCTTTCGC
ACGACCTATG CGCTGAGCGG CGTCTATGAG GGTCTCGATG CGACGGGCAC GGCCGACGCG
GTAACGGCGA CGCTGACCTA TGCGATGCGG CGCCAGCACG ACGACAGCAT CTATATCTCG
GGCAACTACA GCCATATGTC GTTGAACGAC AAAGCGCTTG GCGTTTCCTT CGCGCAGAGG
ACGATCGATC TCGGCACGGC GGCGATCACC CGCGACACGT TCAGCGACTT CATCGGCCTG
CCGCTGACGA CGAGCACGAC CTTCTCCTTC ACCGCGGGCT ATGTGAACTT CCCGGACCCC
AAGCAGGAAG TCGCCAATAT CGCGACGATC GACACCGCCG GCAATTACGC GAAAATCAAT
CTCTCCTTTA TCGCGACCCT CGCGCTCGCC GAGAGGCTGT CGCTTTCGGC CAATGTCAGG
GGGCAGAAGT CGCTGTCGGG CAACCTCGAT TCCAGTCAGC AAATGAGCCT CACCGGCTAT
TGGGGCGTGC GCTCCTATGA TGAAGGGCTG AGCGGAGACA GCGGCTATCT CGTGACGCCC
GAGCTGAAAT ACGCCCTGCC TGACATTTAC GGCTATCGCC ATGCGGTCGG CCTCTTCACC
GACGTCGGCG CCGCGTGGCT GGAAAACGGC TCCTACACCC TGGCGCAGAA GAGCTACACG
CAGCTGAATG ATTTCGGCCT CAGCTACAAT GCGACCTATG AATATTCGCC CGGGCGGTTC
TTATTGGCGA AGGCGCTGGT CGCCCACACC TATGGCTCCG ACTTCGGCGC GAAGAGCTAC
GACCGGACCA CCAAGGGGCT GGTGCAGGTC GGCTTCACGT TCTGA
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| Protein sequence | MKLRTFLVGC GALEAMLAGA FPARAQTPAP IVPFNIGDAV RESEQSRRPP LPAPAAAPVL
PQLVEPQFTM KDKETLFVRS IEIEGPDLGA GAEARELIAP YENRTLQLGE IYGLADQLTT
LYRTKGYLVA KAYIPAQDAR SGALRIKLVP GLYGTITIKN DSLVRDDYLR GVIDQALAGS
PVIQKDPLER AMLLISDLPG AGMPRVAIGP GQQPETSDFV FSAPEARRLD GYLLGDNFGS
PFTGRDRLSG GLNLNSPLGY GDRLSAFGIV SERAGLVNGR ASYSFPIFYD GLRAEIGAFR
TTYALSGVYE GLDATGTADA VTATLTYAMR RQHDDSIYIS GNYSHMSLND KALGVSFAQR
TIDLGTAAIT RDTFSDFIGL PLTTSTTFSF TAGYVNFPDP KQEVANIATI DTAGNYAKIN
LSFIATLALA ERLSLSANVR GQKSLSGNLD SSQQMSLTGY WGVRSYDEGL SGDSGYLVTP
ELKYALPDIY GYRHAVGLFT DVGAAWLENG SYTLAQKSYT QLNDFGLSYN ATYEYSPGRF
LLAKALVAHT YGSDFGAKSY DRTTKGLVQV GFTF
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