Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2587 |
Symbol | trmE |
ID | 7093241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2825930 |
End bp | 2827276 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643465902 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002362872 |
Protein GI | 217978725 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.147171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATGGGT TAGAGGGTTC CGCGCCGATC GGGCGCAGCG GAGATACGAT CTTCGCCGTC GCCTCGGGCG CCGGGCGCGC GGCGGTTGCG ATTCTGCGCC TTACGGGACC GGCCAGCGGC GCGATTGTCA AGGCCGTCGC GGGACGCCTG CCGCCTCCTC GCGTCGCGAC GCTGGCGACG TTCAGAGATC CGGCGACAGG CGAAGCGATC GATCAAGGGC TCGTCATTTT TTTTCAAGGT CCGCGCAGCT ATACCGGCGA AGACAGCGCT GAATTTCACA TCCATGGCGG GCGGGCGGTG GTCGCCGGGC TGATCGCGGC GATCGGCTCT TTCGAGGGCG CGCGCGCGGC GGAAGCGGGC GAATTTTCGC GCCGCGCCTT GATGAATGGC AAGCTGGATC TTGGACAGAT CGAGGGGATC GGCGATCTTG TCGCCGCCGA AACCGCATCG CAGAGGCGTC AGGCGTTGCG GCAGACGGCG GGGATGCTGG GGCGGCGCGC CGGCGGCTGG CGGGCCGCCT TGATTGAAGC CTCCGCGCGG ATTGCAGCCG ACATCGATTT TTCCGATGAA GGCGATGTCG CCGCGGCGCC CGCGCTCGAC ATCGCTCCCA TCATCGCGCC TGTGCTTGCC GAATTGCGGG GCGAGCTTCA TGCGGCCCGC GCCGGCGAGC GGATCAGGGA GGGGCTGACC ATCGTTATCG CCGGGCCGCC CAACGCGGGG AAATCGACGC TGCTCAACGC TCTGGCCCGC CGCGATGTGG CGATTGTATC GAAACACGCC GGAACCACGC GGGATGTGCT GGAGGTCGAA CTTGATCTTG GCGGTTATGC CGCGGTGCTG ATCGACACCG CGGGGCTGCG CGAGACGACC GACCCGGTCG AGCAGATCGG CGTCTCGCGC GCTCTGGAGC GGGCGCAAAA CGCCGATCTT GTGCTTTGGC TAAGCGAGCT TGGAGACTTT CAGGCGCCCG ACGCGAGATT GACCGACGCC GAGCTGTGGC AGGTCGCAAC GAAAGCGGAT CTGGCGCCGA GCGCGCAAGC GGAGGCGGCG CTTTGCATCA GCGCGGCGAG CGGCCTCAAC CTCGATGTGT TGCTCGACCG GCTGGCGCAA TTTGCCGCAG AAGCTGGCGG GGCGGGTCAC GACGGCGTCA TAACGCGAGA ACGCCATCGG AAATCCATCG CCGAGGCGGA GAGCGCTTTG GCCCGCATCC TGTCGGATTC CGCGCCTGTG GAGATCGTCG CCGAGGATTT GCGGGCGGCT CTTTTCGCGC TGGAGAGACT CGTCGGCCGG GTTGATGTAG AAGACATCCT TGGCGATATT TTTTCACGGT TCTGCATCGG GAAATAG
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Protein sequence | MNGLEGSAPI GRSGDTIFAV ASGAGRAAVA ILRLTGPASG AIVKAVAGRL PPPRVATLAT FRDPATGEAI DQGLVIFFQG PRSYTGEDSA EFHIHGGRAV VAGLIAAIGS FEGARAAEAG EFSRRALMNG KLDLGQIEGI GDLVAAETAS QRRQALRQTA GMLGRRAGGW RAALIEASAR IAADIDFSDE GDVAAAPALD IAPIIAPVLA ELRGELHAAR AGERIREGLT IVIAGPPNAG KSTLLNALAR RDVAIVSKHA GTTRDVLEVE LDLGGYAAVL IDTAGLRETT DPVEQIGVSR ALERAQNADL VLWLSELGDF QAPDARLTDA ELWQVATKAD LAPSAQAEAA LCISAASGLN LDVLLDRLAQ FAAEAGGAGH DGVITRERHR KSIAEAESAL ARILSDSAPV EIVAEDLRAA LFALERLVGR VDVEDILGDI FSRFCIGK
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