| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2447 |
|---|
| Symbol | |
|---|
| ID | 7093999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2668493 |
|---|
| End bp | 2669521 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643465768 |
|---|
| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
|---|
| Protein accession | YP_002362738 |
|---|
| Protein GI | 217978591 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.153709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA TGAAACTGGC GCGCGGTTTG GGGCTCGGTC TTGCCCTGGC CGCCGGCGCC
CTCTTTCCCC TGCATGACGC TTCGGCGCAG ACCAAGGTGA AGATCGGCTA TATCCCCGTC
CTCGGCTCGG CGCAGCTCTT TGTCATCGAC GGCCAGGGTT GGGCCAAGGA CGAAGGCCTC
GACCTCGAAC TGATCCGCTT TCAAGCCGGC ACGCAGGCGA TCCAGGCGCT GGCCGCAGGC
CAGCTCGACG CCTATCTTGC AGGCGTCCTG CCGCTTCTCG TCGCGCGCTC CAAGGGCGTC
GACGTCAGGG TCGTCGCCGC CGCCGCCATT GAGGAATTGC AGCTCGTCGG GCGCGGCCTC
CTGCTCGCCG CGACGGAAGG CGCCGACTTC AAGACCGCCA TCGCCAATTT CACCGCAACG
CAGGGCCGCA AGCCAAAAAT CGCGGCGCAG CCGCAGGGCT CGGTTCCCGA CACGCTGCTG
CGCTATTGGC TGCAGGTCGA AAACGGGATT GATCCGTCAA GCGTCGACAT CACGGGCCTC
GACATCGACG CGGCGCAGCA GGCCTTCCTC GCCGGATCGG TCGACGCCGC CGTGCTGCGC
GAGCCGGCCC TGACCGTCGT GCGCGACCGG GTAAAAGATT CGAAGGTCCT CGTCACCGGC
CATCAATTCA TGCCGGATCA GCCCGGCTCG GTGCTTGCGC TTTATAAGCC CGGCGAGCCG
CAAAACGCCG CGACCGGCGA AAAGCTGCTG CGCCTGCATC TGCGCGCGAC CGAGCTGATC
AAGGCGCATC CCGATCAGGC CGCGCCCTTC ATCCTCAAGG CGCTTGGCTC CGGCATTCTG
ACGCCGGCGC AGATCGATCG CGCGCTGGCG GGATCGCTGT CGTCCTTCGT CACCGATCCG
GCGCGCATCG TCGATTCGGT GGAAAAGCTC CAGGCGTTCG AGATCAAGCT TGGAACCGTC
AAGAACGCGA CGCCGGTCGC GGATCTGTTC GATCTCGCCT TCTATCAGCG CGTCGCCGCC
GCAAAATGA
|
|---|
| Protein sequence | MNFMKLARGL GLGLALAAGA LFPLHDASAQ TKVKIGYIPV LGSAQLFVID GQGWAKDEGL
DLELIRFQAG TQAIQALAAG QLDAYLAGVL PLLVARSKGV DVRVVAAAAI EELQLVGRGL
LLAATEGADF KTAIANFTAT QGRKPKIAAQ PQGSVPDTLL RYWLQVENGI DPSSVDITGL
DIDAAQQAFL AGSVDAAVLR EPALTVVRDR VKDSKVLVTG HQFMPDQPGS VLALYKPGEP
QNAATGEKLL RLHLRATELI KAHPDQAAPF ILKALGSGIL TPAQIDRALA GSLSSFVTDP
ARIVDSVEKL QAFEIKLGTV KNATPVADLF DLAFYQRVAA AK
|
|---|
| |