| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2408 |
|---|
| Symbol | |
|---|
| ID | 7093960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2623206 |
|---|
| End bp | 2623967 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643465730 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002362700 |
|---|
| Protein GI | 217978553 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1511] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATC ACGCCATCCG GGCGATCTAT ATCTTCGAGA TGGGCCGCGC CTTTCGCACG
CTCTTGCAAA GCATCGTCTC GCCGGTGATC TCGACCTCGC TTTATTTCGT CGTCTTCGGC
GGCGCCGTCG GCTCGCATAT GGCCGCAATC GACGGCGTCA GCTACGGCGC CTTCATTGTG
CCGGGCCTCA CCATGCTGTC GGTGCTGACG CTCAGCGTCG CCAACGCCTC CTTCGGCATT
TATTTTCCGC GCTTCGCGGG AACGATCTAT GAGATTTTGT CGGCGCCGGC GTCGGCCTTC
GAGATTGTCT GCGGCTATGT CGGCGCCGCC GCGAGCAAAT CCATTCTGAT CGGCGTCATC
ATTCTCATCA CGGCGCGCTG CTTCGTCCCC TTCGACATCG CCCACCCATT CTGGATGGCC
GCGTTTTTGA TCCTCACCGC CGTCTCCTTC AGCCTGTTCG GCTTCATCAT CGGCGTCTGG
GCCGACGGCT TCGAGAAGCT GCAGCTCGTG CCGCTTCTGA TTGTGACGCC GCTGACTTTT
CTTGGCGGCA CTTTTTATTC GATCGACATG CTGCCCCCGT TCTGGCGAAC GCTCACGCTG
GCCAATCCGG TCGTCTATCT CATCAGCGGA TTCCGCTGGA GTTTTTTCGG AACCGCCGAT
GTCGGGGTCG GCCTCAGCCT CGCCATGACG CTCGGCTTCC TCCTCTTGTG CCTTGCTCTG
ATCACCTGGA TTTTCCGCAC CGGCTATCGG CTGAGAGCAT AG
|
|---|
| Protein sequence | MNYHAIRAIY IFEMGRAFRT LLQSIVSPVI STSLYFVVFG GAVGSHMAAI DGVSYGAFIV
PGLTMLSVLT LSVANASFGI YFPRFAGTIY EILSAPASAF EIVCGYVGAA ASKSILIGVI
ILITARCFVP FDIAHPFWMA AFLILTAVSF SLFGFIIGVW ADGFEKLQLV PLLIVTPLTF
LGGTFYSIDM LPPFWRTLTL ANPVVYLISG FRWSFFGTAD VGVGLSLAMT LGFLLLCLAL
ITWIFRTGYR LRA
|
|---|
| |