Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2354 |
Symbol | |
ID | 7090338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2561846 |
End bp | 2563186 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643465676 |
Product | type VI secretion protein, VC_A0114 family |
Protein accession | YP_002362646 |
Protein GI | 217978499 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.401785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTCCT GGTACAGTAA AGTCCTTTGG TCGGAAGGAC TTTTCCTTCG CCCCCACCAC CTTCAGCAGG CCGACCGTTA CCTCGAACAT CTGATCGAGG CGCGAACGCG CAGCGCCACC CCCTATCCCT GGGGTTTTTC GCATCTTGAG ATCGACCGCG ACCTTGCGCA GCAGAGCAAA TTCGCGGTGC GCCGCGCGGC GGGGGTGATG CCGGACGGAA CGCCCTTCGA CATTCCCAAC GACAGCCCGG CGCCGCCGCC GCTCGAAGTG CCGGATGGCG CGGCGCAACA ACTGCTCTGG CTGTCGATGC CGACCGCTTC ATCAAATACG CGCGAGGTCG ATTCGGCCGA TTCGTCGAGC GCCAGCCGCT TCGTCATCGG CGCCGAGACC TTTATCGATT CGACCTCCTC GCTGCGCATC GAGGAGGAGA TCGACGTCGC CTATCCGCGC CTCGCCTTCG ATCTGCGCAA GACGGCCAAG CCCGGCTTTC AGGGGCTCCC CATCGCCCGC ATCGTCGAGG TGCGCGATAA ATCGATCGTT TTCGACGAGA AATTCGCCCC GACCGTTCTG GTCTGCTCGG CTCATCCGAC CGTCGAGGGC TGGCTCGACC GGGTGATCGG CTGGATCGAC GCAAAGCTCG GCGAACTCGC CCGCTATGCT GCGGACCCGA CCGCGGGCGG CGGACTGCAA AGCGTCGATT ATCTGGTGCT GCAAGTCCTG AACCGCCACA TCACGGTGAT GCAGCATCTG CGCGGATCGC GCTATGTCCA TCCCGAACGG CTCTATGTCG AGCTGATCCG GCTCGCCGGG GAACTTGCGA CCTTCGCCAC CACCGAGCGC CGCGCGAGGC TCTATCCGCT CTACGACCAT GACAATCTGG AGGCGAGCTT CGCGCCCGTC CTGCGCGATC TGCAGGATTT CCTTTCGGCG CGGCTGGGGC GGCGGGCGAT CCGCCTCGAC ATCATCGCGA GGGCGGAGAA CGCCTTCATC TCGCCGATCC GCGACCGCAG CCTGTTCCGC AACGCAAGCC TCGTCCTCGA AGTGGCGGCG CGCCGGCCGC TGACCGAGAT TCAGTCGAGC TTCCCGCATC TGTTCAAGGT CGGCCCCGGC TCCAAGATGA ACGAAATCGT GCACGCCCAT CTGCCCGGCG TGCCGCTGGT GCATCTGCCG ACGCCGCCGC CGCAGATCCG CGCCATCACC GACCATGTCT ATTTCTATCT CGACCGCACC TCGCCGCTAT GGCCGGAATT CTCGACGGCG AGTTCGATCG GCATGCATTT CTCCGGCGAT TGGCCCGAGC TCAGCCTCGA GCTCTGGGCC GTCCTGGAAG ACCGGTCATG A
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Protein sequence | MMSWYSKVLW SEGLFLRPHH LQQADRYLEH LIEARTRSAT PYPWGFSHLE IDRDLAQQSK FAVRRAAGVM PDGTPFDIPN DSPAPPPLEV PDGAAQQLLW LSMPTASSNT REVDSADSSS ASRFVIGAET FIDSTSSLRI EEEIDVAYPR LAFDLRKTAK PGFQGLPIAR IVEVRDKSIV FDEKFAPTVL VCSAHPTVEG WLDRVIGWID AKLGELARYA ADPTAGGGLQ SVDYLVLQVL NRHITVMQHL RGSRYVHPER LYVELIRLAG ELATFATTER RARLYPLYDH DNLEASFAPV LRDLQDFLSA RLGRRAIRLD IIARAENAFI SPIRDRSLFR NASLVLEVAA RRPLTEIQSS FPHLFKVGPG SKMNEIVHAH LPGVPLVHLP TPPPQIRAIT DHVYFYLDRT SPLWPEFSTA SSIGMHFSGD WPELSLELWA VLEDRS
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