Gene Msil_2324 details

Gene Information

• Locus tag: Msil_2324
• Symbol: hrcA
• ID: 7090308
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 2520567
• End bp: 2521661
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643465647
• Product: heat-inducible transcription repressor
• Protein accession: YP_002362617
• Protein GI: 217978470
• COG category: [K] Transcription
• COG ID: [COG1420] Transcriptional regulator of heat shock gene
• TIGRFAM ID: [TIGR00331] heat shock gene repressor HrcA

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 0.0528523
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCACGC CTCTCGACCA CTCCCTCGAT CGGGTGCGCT CCCGAGGCCT CACCAGCCTC 
AACGAGCGGT CCCGAGAAAT CTTCCGGCAA ATCGTCGATT CCTATCTTGC CTATGGCGAG 
GCGGTCGGCT CGCGCCAGGT GTCGAAGCTG CTGCCGACGC CGTTGTCTCC GGCGTCCGTT 
CGCAACGTCA TGCAGGACCT CGAAGAAATC GGGCTGATTT ACGCGCCCCA TACCAGCGCG 
GGACGACTGC CGACCGAGCT TGGTCTGCGC TTTTTCGTCG ACGCCATGCT GGAGCTCGGC 
GACGTCGGCC CCGGCGAGCG GGAGCAGATC GAGGCGCAGG TCAAGGCCGC CGCCTATGAG 
CAGCCGCTCG AAGGCGTTCT TGGCGACGCG ATGAGCCTGC TCTCCGGGCT GACGCGCGGC 
GCCGGCGTCG TGGTCACCAT GAAGGAAGAC GCGCGGCTGA AACATATCGA ATTCGTGCGG 
CTCGAGCCCG AACGCGCGCT GGCCGTCCTC GTCGCCGACG ATGGATCGAT CGAAAACCGC 
ATTCTGCATA TCCCGCCGCT GCTGCCGCCT TCCGCTTTGG TCGAGGCGGC GAATTTCCTC 
AACGCGCGAA TTCGTGGCCG CACCCTCGCC GAGGTCCGGC GCGAGATCGA AGCCTCGCAG 
ACCGCAGCCG AGCGTGAGCT TGGCGAGCTG ACCGCCCGGC TGGTCGACGC CGGCCTTGCG 
AGCTGGGCCG ACAGCGCGGG CAGCGGCCCG CAGCTGATCG TCAGGGGTCA GGCCAATCTG 
CTGCAGGACC TCACCGCGAT CGAAGATCTC GAACGTATCC GCCTGCTGTT CGCCGATCTC 
GAGACCAAAA AGGACGTGAT CGACCTTTTG AGCCGGGCGG ACAGCGGCGA GGGGGTGCGC 
ATCTTCATCG GCTCGGAAAA CAAGCTGTTC TCGCTCTCCG GCTCGTCCAT GATCGCCGCG 
CCCTTCCACG ACGAGCATCA GCGCATCGTC GGCGTGCTCG GGGTGATCGG GCCGACGCGG 
CTGAATTACG CGCGCATCGT GCCGATGGTC GATTACACCT CGAAGGTGGT GTCGCGGATG 
CTGCAAAATC GCTGA 

 

Protein sequence

MATPLDHSLD RVRSRGLTSL NERSREIFRQ IVDSYLAYGE AVGSRQVSKL LPTPLSPASV 
RNVMQDLEEI GLIYAPHTSA GRLPTELGLR FFVDAMLELG DVGPGEREQI EAQVKAAAYE 
QPLEGVLGDA MSLLSGLTRG AGVVVTMKED ARLKHIEFVR LEPERALAVL VADDGSIENR 
ILHIPPLLPP SALVEAANFL NARIRGRTLA EVRREIEASQ TAAERELGEL TARLVDAGLA 
SWADSAGSGP QLIVRGQANL LQDLTAIEDL ERIRLLFADL ETKKDVIDLL SRADSGEGVR 
IFIGSENKLF SLSGSSMIAA PFHDEHQRIV GVLGVIGPTR LNYARIVPMV DYTSKVVSRM 
LQNR