| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2318 |
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| Symbol | |
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| ID | 7090302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2510248 |
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| End bp | 2512095 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643465641 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_002362611 |
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| Protein GI | 217978464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.0070259 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCAGCT CCGAATCCGT GAAAGACAGG CCGGAGAGCG TGACGGACCG ACGGCTCGCC
TCTCTCGTCC GATCGCTCGG CGATCGCTCG ATCGTCCTCG TCGGCTTCAT GGGCTGTGGC
AAGACCTCGA CCGGCCGGCG TCTCGCGCAG CGGCTCGGCT TGCCTTTCAT AGACGCCGAC
GCCGAGATCG AAGCGGCCGC CGGCATGACC ATCGCCGAGA TTTTTGCAAG GCACGGCGAG
CCTTCGTTCC GTGACGGCGA GCGCCGCGTC ATGGCCCGGC TGCTCGAACA CGGCCCCCGC
GTCATCGCAA CGGGAGGCGG AGCCTTTCTC AATGAGGAGA CACGCGCGCG GATCGCTCGT
CGCGGTGTTT CGGTCTGGCT GAAGGCCGAA CCCGACGTGC TGTGGCGCCG CGTGCGCAAG
CGATCGCACC GGCCCTTGTT GCAAAGCGCC GATCCCGAAA AAACGCTGCG CACGCTGTTG
CGCGAGCGTT ATCCCTATTA TGCTCGGGCC GACGTCACCG TGATTTCGCG TGACGGCCCG
CATGAGACAG CGGTTGAGGA AATCATCGCC GCGGTCGAGT TTTTCATGCG CTTTTCCCCC
GAGCCGCCCA TCCTTGCCGT GTTGGACCCG ATGAATCACG CCGCAAAGCC GCCGCTGCCG
CCGATCCCCT CCGCCGATGG CGAGCCTCTC TTCGGCCCCG CGGCCACGAC CGCGCCGGCG
CCGGCGGCCC AGGACGCCGC CGCAGTGCGG GTCGAACTCG GCGAGCGGTC CTACGACATT
CTGATTGGCG CGGGGCTTAT TGCGGCGGCG GGAGCTTGCG TGCGGCGGCT GGCGCCCGGC
GCCGCCTGCG CCATCGTCAC GGACGCCAAT GTGGCCGCCC TGCATCTTGC CGAGCTGGAG
CGCTCGCTGC GCGAGGCGGG CGTGCGCTAT AGCGCTGTGA TCATCCCGCC GGGCGAGCAG
TCCAAATCCT ATGGCGTCTT CGCCAAGGTC TGCGACGATA TTCTTGCGGC GCGGCTCGAA
CGGGGCGATC TCGTGATCGC GCTCGGCGGC GGCGTCATCG GCGATCTGGC GGGCTTTGCC
GCCGCCTCGA TCCGGCGCGG CATGCGCTTC GTGCAGATCC CGACAAGTCT GCTCGCCCAG
GTCGATTCCT CCGTCGGCGG CAAGACCGGG ATCAACTCCG AGCACGGCAA GAATCTGATC
GGCGCCTTTC ATCAGCCCTC TCTGGTGCTG GCCGACGCCG ACGCGCTGGC CACCCTGCCG
CTGCGCGAAT TCCGCGCCGG CTACGCCGAG ATCGTGAAAT ACGGGTTGAT CGGCGATGCG
CCCTTCTTCG CCTGGCTCGA GACTCATTGG CGCGGCGTTT TCGCGGGCGG CCCGGATCGC
GTCCACGCCA TCGCGACGAG CTGCCGCGCC AAGGCGGCGA TCGTCGGCCG CGACGAGCGG
GAAAGCGGGG AGCGCGCGCT GTTGAATCTC GGCCACACCT TCGGCCATGC GCTGGAGCGC
ATCAACCATT ACGACGGCGA GCGGCTGGTG CATGGCGAGG CTGTTTCGGT CGGGCTGGCG
CTCGCCTTCC GCTTCTGCGC CAGAGTCGGG CTCTGCGAGG GCGCCGACGC GGACCGCGTT
GAGGCGCATC TGCGCGAGGT TGGCCTGCCG ACGCGGATCG CCGACATCCC CGGCCTCGCG
CTTGACGCCG ATCAGATGCT CGATGCCATG CGCCAGGACA AAAAGGTCGA GCGCGGCGCC
CTGACCTTCG TTCTGGCGCG CGCGATCGGC GACTGTTTCG TCGCCAAATC GGTCGAGGCG
GCCGAGGTGC GCGCTTTCCT CGAGGCCGAG CTCAACACAG GACTTTGA
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| Protein sequence | MTSSESVKDR PESVTDRRLA SLVRSLGDRS IVLVGFMGCG KTSTGRRLAQ RLGLPFIDAD
AEIEAAAGMT IAEIFARHGE PSFRDGERRV MARLLEHGPR VIATGGGAFL NEETRARIAR
RGVSVWLKAE PDVLWRRVRK RSHRPLLQSA DPEKTLRTLL RERYPYYARA DVTVISRDGP
HETAVEEIIA AVEFFMRFSP EPPILAVLDP MNHAAKPPLP PIPSADGEPL FGPAATTAPA
PAAQDAAAVR VELGERSYDI LIGAGLIAAA GACVRRLAPG AACAIVTDAN VAALHLAELE
RSLREAGVRY SAVIIPPGEQ SKSYGVFAKV CDDILAARLE RGDLVIALGG GVIGDLAGFA
AASIRRGMRF VQIPTSLLAQ VDSSVGGKTG INSEHGKNLI GAFHQPSLVL ADADALATLP
LREFRAGYAE IVKYGLIGDA PFFAWLETHW RGVFAGGPDR VHAIATSCRA KAAIVGRDER
ESGERALLNL GHTFGHALER INHYDGERLV HGEAVSVGLA LAFRFCARVG LCEGADADRV
EAHLREVGLP TRIADIPGLA LDADQMLDAM RQDKKVERGA LTFVLARAIG DCFVAKSVEA
AEVRAFLEAE LNTGL
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