Gene Msil_1960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1960 
Symbol 
ID7094078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2132600 
End bp2133499 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content59% 
IMG OID643465287 
Productdomain of unknown function DUF1738 
Protein accessionYP_002362265 
Protein GI217978118 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCG ACGTTTATCA GCGTGTCACG GATCAGATTA TTGCAGAGCT TGAGAAGGGC 
GTGAGGCCTT GGCTGAAGCC TTGGAATGCG GAGCAAGCGG CAGGAAGGAT CACCCGTCCG
CTGCGCGGTA ATCTCATTCC CTATCAGGGC ATAAACGTCA TCATGCTCTG GGCGGAAGCG
ATGGAAAAGG GCTTTGCGGC ACCGATCTGG ATGACCTTCA AGCAGGCTCT GGAACTGGAC
GCTCATGTCC GCAAGGGCGA AAAGGGAAGC CTTGTCGTGT TTGCTTCAAG CATGACGCGC
ACCGAGACCG TCGAAGCGAC CGGCGAAGAG GAGGAGCGCA ACATTCCCTT CATGAAGGGC
TACACCGTGT TCAACGTCGA GCAGGTGGAC GGACTTCCTG CGCACTACTA CGCGACAGCG
GAGGCGCGCC TTGATCCAGT GAAGTGCAAT GCGGCAGCGG AAACGTTCTT CGCAAACACC
GCCGCCCAAA TCCGGCATGG CGGCAACATG GCCTATTACA GCACGGGACC CGATCACGTG
CAGATGCCGC CTTTTGAAAC CTTCCGCGAT GCAGAGAGCT ATTACGCGAC GCTCGCACAC
GAGGTGACGC ACTGGACGAA GCATCCGAAG CGGCTCGACC GTGACTTCGG GCGCAAGCGG
TTCGGCGATG AAGGCTATGC GATGGAGGAG CTGGTCGCGG AGCTTGGCGC GGCTTTCCTG
TCTGCCGATC TCGATCTCAC CCCGGAGGTT CGCCCCGATC ATGCTTCCTA TATCGAGAAT
TGGCTGAAGG TGCTGAAGGA GGACCGGCGC GCCATCTTTG CGGCAGCTTC GCACGCACAG
CGCGCGGCGG ACTTTCTGAA CGGGTTTCAG AAGTCAGACA TACAGGCGCA TGCCGCCTGA
 
Protein sequence
MRSDVYQRVT DQIIAELEKG VRPWLKPWNA EQAAGRITRP LRGNLIPYQG INVIMLWAEA 
MEKGFAAPIW MTFKQALELD AHVRKGEKGS LVVFASSMTR TETVEATGEE EERNIPFMKG
YTVFNVEQVD GLPAHYYATA EARLDPVKCN AAAETFFANT AAQIRHGGNM AYYSTGPDHV
QMPPFETFRD AESYYATLAH EVTHWTKHPK RLDRDFGRKR FGDEGYAMEE LVAELGAAFL
SADLDLTPEV RPDHASYIEN WLKVLKEDRR AIFAAASHAQ RAADFLNGFQ KSDIQAHAA