Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1841 |
Symbol | |
ID | 7094120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2005681 |
End bp | 2006481 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643465168 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002362148 |
Protein GI | 217978001 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.197421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGGA CTGACGACGG AAGGCGCGTG GCGCTGATCA CAGGCGCCTC CGGCGGCATC GGCGCCGACC TTGCGCGGGT TTTCGCGCGC AACGGCCATG ATCTGATGCT TGTCGCGCGC AGCGACGACA AGCTTGCCGC GCTTGCGGAT GAAATCGAAC GCGCGACCAG CCGGCGGCCG CTGCGGCTGG CGCTCGACCT TTCCGACCCG AAGGCCGCTG ACGCCATCGA GGCGGCCCTC CAGCAAAACG GAGCGCGCGT AAAGATCCTC GTCAACAATG CTGGCTATGG CCTCAGCGGC GACGTCGGCG AACTCGGCGA GGCCGAACAA TTGGGCGTCA TCGACTTGAA TGTCCGCGCG CTGACGCAGC TTACCATTCG CTTTCTGCCG GACATCCGCG CCGCGGGCGG AAAAATTCTC AACGTCGCCT CCGTCGCTTC CTATTTTCCA GGCGGCCCCG GCATGGCGAT CTATTACGCT TCAAAGGCTT ACGTCCTATC GTTCTCCCTG GGTCTGGCGC AGGAATTGCT TCAAGACGGC GTGACGGTAT CGGCGCTTTG CCCAGGCATG ACGCCGACCG GCTTTCAGGC CCGCGCCAAA TTCGGTCCCG ACATCAAGCT CGACAAGATC CCGGCGACGA GTTCGATGGA GGTGGCTGAA GCCGGCTACA AGGGCCTTAT GGCGGGGCGG CGGGAAATTA TACCGGGCGG ATTCAACAAA TTGGGCGCAT GGGTCTTGCC CTTCGCGCCA AAGCACATGA TCCTGTCGTT GATTTCGCAA ATGCAACATC AACGCCGTTG A
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Protein sequence | MQGTDDGRRV ALITGASGGI GADLARVFAR NGHDLMLVAR SDDKLAALAD EIERATSRRP LRLALDLSDP KAADAIEAAL QQNGARVKIL VNNAGYGLSG DVGELGEAEQ LGVIDLNVRA LTQLTIRFLP DIRAAGGKIL NVASVASYFP GGPGMAIYYA SKAYVLSFSL GLAQELLQDG VTVSALCPGM TPTGFQARAK FGPDIKLDKI PATSSMEVAE AGYKGLMAGR REIIPGGFNK LGAWVLPFAP KHMILSLISQ MQHQRR
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