Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1707 |
Symbol | |
ID | 7093167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 1855793 |
End bp | 1856980 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643465031 |
Product | cystathionine beta-lyase |
Protein accession | YP_002362016 |
Protein GI | 217977869 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.442893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAGT CGACCAAAGA CGATCACAAG GCGCTAAAGA CCCGAACGAA GCTCGTTTAC GCCGGCCGCC GCCCGTCCGA GCAATTCGGC TTCGTCAATA CGCCGGTCTA TCGCGGCTCG ACCGTGCTGT TCCCCAGCTA TCACGACCTC GTGACCCGCA ATGCGCCCTT CACCTATGGC ACGTCCGGCT CGCCGACGAC CAAGGCGCTG ACCGACGCAT GGACCGAGCT CTGCGGAGCC GCCGGCGCGG CGCTCGCCCC GACGGGACTC GCCGCCATCA CGCTGGCGCT GCTGACCGCG GTCAAAGCCG GCGACCACAT CCTTGTCACT GACTCGATCT ACCGCCCCTC GCGCATTTTC TGCGACGGCG TTCTCGCACG GCTCGGGGTG GAGACGGCCT ATTTCGATCC GCTGATCGGC GCCGGGATCG AACAGCTGAT CCGGCCGAAC ACCAGCGTTA TCTTCCTCGA GACGCCGGGA TCGCAAAGCT TCGAATTGCC CGACGTTCCG GCGATCTTCG CCATCGCGCG GGCGAAGGGG ATATGCGCGA TCCTCGACAA CACCTGGGCG ACGCCCCTGT TCTTCCCGCC GCATGAGCGC GGCGCGGACA TGGCGATCGA GGCCGGCACA AAATATCTCT CAGGCCATTC GGATCTGCTG CTCGGCCTCA TCTCCGCCAC CGCCGAATGG CTGCCGCGCC TTTCCGCCAC AGCTGACGCC TTCGCCATGT GCCCCGGACC GGAGGATGTG TTTCTCGCCC TGCGCGGATT GCGCACGCTG GAACTGCGGC TGCGCGAGGC GCAGGCGCAA GGGCTCGCCA TGGCGCGCTG GCTCGAAGGA CGCCCGGAAA TTGCAGCGGT GCTGCATCCG GCGCTGCCCT CCTGCCCCGG CCATGCCTTA TGGAAGCGTG ATTTCTACGG CTCGACGGGC CTGTTTTCCG TGCTGCTCAA TCCCTTTCCG CAAAAGGCGG TCGCCGCCAT GCTGGATGGG CTGGAACTGT TCGGCATGGG ATTTTCGTGG GGCGGCTTCG AGAGCCTGGT CATTCCATTC GACTGCCGCG CCTATCGCAC CGCGACGCCC TGGTCGCCGC CGGGGCCGGC GCTGCGCTTC AACATCGGGC TCGAGGACGT CGAGGACCTC AAGGCCGATC TCGAGCGCGG CTTCGAGCGG CTGCGCGCCG CGAGCTAG
|
Protein sequence | MTESTKDDHK ALKTRTKLVY AGRRPSEQFG FVNTPVYRGS TVLFPSYHDL VTRNAPFTYG TSGSPTTKAL TDAWTELCGA AGAALAPTGL AAITLALLTA VKAGDHILVT DSIYRPSRIF CDGVLARLGV ETAYFDPLIG AGIEQLIRPN TSVIFLETPG SQSFELPDVP AIFAIARAKG ICAILDNTWA TPLFFPPHER GADMAIEAGT KYLSGHSDLL LGLISATAEW LPRLSATADA FAMCPGPEDV FLALRGLRTL ELRLREAQAQ GLAMARWLEG RPEIAAVLHP ALPSCPGHAL WKRDFYGSTG LFSVLLNPFP QKAVAAMLDG LELFGMGFSW GGFESLVIPF DCRAYRTATP WSPPGPALRF NIGLEDVEDL KADLERGFER LRAAS
|
| |