| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1690 |
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| Symbol | |
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| ID | 7093150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1832775 |
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| End bp | 1834211 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643465014 |
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| Product | type I secretion outer membrane protein, TolC family |
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| Protein accession | YP_002361999 |
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| Protein GI | 217977852 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.522729 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACCG AAAGTTTGGT TGACGCCTCG CATCGAGCCG CTTCGTCCTG CATCGACCTC
AACCGAGGCA AGTTCGCAAA AGCGCTCGCC ATAGCCCTTT TCGGCTCGAT TGCCGCTGCC
AATCCGGCCG GGGCCGAAAC CATGTCGAGC GCGCTGGTTC GCGCTTATAT CGGCAATCCG
GATATGAACC AGCAGCGCGC GGGCGTTCGC GCGCAGGACG AGAATATCCC CCGGGCGACC
TCGGGCTGGC GTCCGCAGGC CAGCGCGACC GGGCAGGTTG GCTATAATTA TCAGGACTTT
CGCCAGCTCG GCACGCGCCT CAATGGCAGC ACCCTGCCAA CCTCCATCGG TCTCTCGGTC
ACGCAAAATG TCTTTAACGG CAACCGCACG CTGAATTCGG TGCGGCAGGC CGAGTCGGGC
GTCTTCGGCG CCCGCGAGGA TCTGCGCAAC ACCGAGCAGA ACGTCCTGCA GAACGGCGCG
ACCGCCTATA TGAATGTGCT GCGCGACACC GCCGTGCTTG AGCTTCGCCG CAACAATATC
ACCGTTCTCG AAGAGCAGCT GCGCCAGACG CGCGACCGCT TCAATGTCGG CGAAGTGACC
CGCACCGACG TGGCGCAGGC GGAATCGAGC CTGGCGAATT CGCGCTCGGA ATATTTCGTC
GCGCAAGCCA ATCTTCAAAA CAGCATCGCC AATTTCCGCC AGATCATCGG CGTCGAGCCG
ACCCGTCTCG AGCCGGCGCG CACCATCGAG GCCCTGCTGC CGAAGAACAT GAATAGCGCG
GTGGCTCTGG CGCTCGAGGA GCATCCGGCG ATTCAGGCGG TGCTACATGC GGTCGATCAG
GCGGAATTGC AGGTCAAGCT GGTCGAGGGC GAACTGGCCC CGAGCGTCAA TATCGTCGGC
AGCGTGCAGC GCGCGACCGA CTATCAGGGC ATTCGCAACG CGAGCCTCGT CAACGGACAG
GTGGTCGGAC AGATCTCGGT GCCGATCTAT ATGGGCGGCG AAGTCTACGC CCGCGTCCGC
CAGGCGAAGG AGACGCTGGC GCAAACGCGG CTGCAAGCCG ATCTGCAGCG CGACTCCGTC
CGCGCCACCG TGGTCTCGGC CTATGGGCAG CTCGACTCGT CGAAAGCGGT CATCCAGTCG
GCCAAGGCCG CGGTGAAGGC GGCGGAAATC GCCCTCGACG GCATCCGCGA GGAGGCCAAG
GTCGGCCAGC GCACGACCTT CGACGTGTTG TTCGCGCAGC AGACGCTGCT GAACACGCGC
GTCAGCCTCG TCACCGCCCA GCGCGACCGC GTCGTCGCCT CCTACAATGT GATGGCGGCG
ATCGGCAAGC TCTCGGCGGC CAACCTCAGC CTGAACGTCG CCGAATATGA TCCGACCGTC
CATTTCGAGC AGGTCAAGGA CAAGTGGATC GGCCTGCGCA CGCCGGACGG GCGCTAA
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| Protein sequence | MGTESLVDAS HRAASSCIDL NRGKFAKALA IALFGSIAAA NPAGAETMSS ALVRAYIGNP
DMNQQRAGVR AQDENIPRAT SGWRPQASAT GQVGYNYQDF RQLGTRLNGS TLPTSIGLSV
TQNVFNGNRT LNSVRQAESG VFGAREDLRN TEQNVLQNGA TAYMNVLRDT AVLELRRNNI
TVLEEQLRQT RDRFNVGEVT RTDVAQAESS LANSRSEYFV AQANLQNSIA NFRQIIGVEP
TRLEPARTIE ALLPKNMNSA VALALEEHPA IQAVLHAVDQ AELQVKLVEG ELAPSVNIVG
SVQRATDYQG IRNASLVNGQ VVGQISVPIY MGGEVYARVR QAKETLAQTR LQADLQRDSV
RATVVSAYGQ LDSSKAVIQS AKAAVKAAEI ALDGIREEAK VGQRTTFDVL FAQQTLLNTR
VSLVTAQRDR VVASYNVMAA IGKLSAANLS LNVAEYDPTV HFEQVKDKWI GLRTPDGR
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