| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1646 |
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| Symbol | |
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| ID | 7091003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1778382 |
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| End bp | 1780451 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643464971 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002361956 |
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| Protein GI | 217977809 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.346775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTG GTCAGTTGAA TGAATGGGCG CCTCCCGAGG CGGGAGCGGA TCCAGCGCAG
GAGCGCGTCA TTATGAAGGC GTGGGAAGAT TATCTTTCCG GCGTCTCCCA TCGCCTCAAG
GTGCGCAATG TCGTCGCGAA ATCCTGGCAG CGTTGCGCTG CCATCGGCAT TGACCACAAA
GTCGCGGGAT CGCGAACCAT CGTCGCGCAA CGCGAATTCG AGCAGAGGCT GCGCGCCAAC
AGCCTGCTGC TGCAAGCAGC GTCGAAGGTC TTTTCGGAAG CGCAGCAAAC GCTGACCGGA
ACGGGCTCCA TGCTCATTCT GACTGACGTC GACGCTGTTG TTCTTGACGC CGTCGGAGAT
CCGGGCACCC TCGAAGCGGG CCGGGACATC AATCTGGTCA TCGGCGCCGA TTGGAGCGAG
GCCAACGCTG GAACAAATGG CATCGGCACC ACGCTGGCCT CGCGCTCGCC GGTGCTGATT
CATGGCGCTG AGCATTTCTG CGCCCTGACC AAGAACTGGA CCTGCGTTGG CGCTCCGGTG
CGCAACCCGC TCGATGGCTC CCTCCTGGGC CTCGTCGACA TGTCCGGGGC GAAGAACACG
TTTCAGCAGC ATAATCTCGC CTTCGCCGTG ATGGTCGCCG GTCGAATTGA AGCAGCGCTT
TCGCTTCAGC TCGAAGGCGA GCGGCGCATG CTCATGGAAT ACAGCTCGGC CATGGGCCGC
GGATGGTCCG ACGGAGTGAT CGTCTGCGAT CGCGGCGGCA GGATCGTCTC GGCCAACGAA
CACGCCTATC GTTTGCTGGC GCGGCGCGGC GAGTCGCGGG ACGGAGTGGA GATGGGTTTC
CAGTCCGATC AACCGTTGTT GAAGCTGAGC AATGACGGAA GAAGTTTCGA CCTGGCGGCC
GCCGCCCGTT ACGGCATCAG CCAGGACAAT CTGCTTCCTG TCCATCACGA TGAGTCCCTC
ATCGGCGCAG TGGTGATCGC AGCCGCCGCG ACGCGGCCGT TGGCTCCGGC CATCAAACGC
GCGAACGCAT TCGATCCGAT CGTCACCAAA TGCGCCGCCA TGCTCGATAT CGTCCATCGG
GCCCGCCGTC TTGCCGTCTA TCACGCGCCG GTGCTGATCG AGGGAGAGAC GGGGGTCGGC
AAGGAGCTGT TCGCCCGGGC GGTGCATGAC GCCAGCCCTT GCGCCGACGG ACCTTTCGTC
GCGTTCAATT GCGGCGCCGT CTCACGCGAG TTGATCGCCA CCGAGCTTTT TGGCTACGTC
AAGGGCGCCT TTACGGGCGC GTCCGCGAAT GGCGCCCTCG GGCGATTCGA GCGCGCCAAC
AATGGGACGC TCTGTCTCGA CGAAATTGGC GAACTGCCGC TTGATCTGCA ACCTTTTCTT
TTACGTGTCC TCGAAGAGGG AACGGTATGC CGCGTCGGCG ACACGACTCC TCGTCCGATA
AAAGTCCGTC TCATCGCGAT GACCAACCGC GACCTTCGCG AGGAAGTGGA AAAGGGCCGT
TTTCGTCGTG ATCTTCTCTA CAGACTGAAT GTCTCGACGC TGAAGGTTCC GCCGCTGCGC
AAACGCGACG GCGACGCCGT ATTGCTCGCG CAGCATTTTG TCGATTATCT ATCGAAAAAG
CATAATCTCG GCCTGAGGCG CTTCGCGCCG GATGTCTTGC GCCTGTTCAA GACCTATCCA
TGGCCAGGCA ACATTCGCGA ACTTCGCAAT GTCGTCGAAA GCGCGCTTTT GCTGTGCGAC
ACGCCGATTA TCGGGCGCGG ATGGCTTCCT GACGAGATTT TGGATTATCG CCCTCCGGAT
ACGGAACGCG CCGCGACGCC GATCGCCGTC GCGCGGTCCG GGCCGGCAGC CGGCCAGTCC
AGCTGCGAGC CAAATTCCGC GAGTGATTTA CGCAGCCTCG ACAAACAGCA CATCGAGCGC
GTGCTGGAGC GTTATCAGGG CAACATCAGC TTGAGCGCCG CCGCCCTCGG CATCGCGCGC
ACAACGCTAT ATCGCCGTCT GCGCGCCTAT GGGCTCGACG CGCCGCGCGA CGGCGAAGCT
GTTTCGGAGA CAGATCAGGT TTCCGATTAG
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| Protein sequence | MDFGQLNEWA PPEAGADPAQ ERVIMKAWED YLSGVSHRLK VRNVVAKSWQ RCAAIGIDHK
VAGSRTIVAQ REFEQRLRAN SLLLQAASKV FSEAQQTLTG TGSMLILTDV DAVVLDAVGD
PGTLEAGRDI NLVIGADWSE ANAGTNGIGT TLASRSPVLI HGAEHFCALT KNWTCVGAPV
RNPLDGSLLG LVDMSGAKNT FQQHNLAFAV MVAGRIEAAL SLQLEGERRM LMEYSSAMGR
GWSDGVIVCD RGGRIVSANE HAYRLLARRG ESRDGVEMGF QSDQPLLKLS NDGRSFDLAA
AARYGISQDN LLPVHHDESL IGAVVIAAAA TRPLAPAIKR ANAFDPIVTK CAAMLDIVHR
ARRLAVYHAP VLIEGETGVG KELFARAVHD ASPCADGPFV AFNCGAVSRE LIATELFGYV
KGAFTGASAN GALGRFERAN NGTLCLDEIG ELPLDLQPFL LRVLEEGTVC RVGDTTPRPI
KVRLIAMTNR DLREEVEKGR FRRDLLYRLN VSTLKVPPLR KRDGDAVLLA QHFVDYLSKK
HNLGLRRFAP DVLRLFKTYP WPGNIRELRN VVESALLLCD TPIIGRGWLP DEILDYRPPD
TERAATPIAV ARSGPAAGQS SCEPNSASDL RSLDKQHIER VLERYQGNIS LSAAALGIAR
TTLYRRLRAY GLDAPRDGEA VSETDQVSD
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