| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1606 |
|---|
| Symbol | |
|---|
| ID | 7090963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1730725 |
|---|
| End bp | 1732071 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643464931 |
|---|
| Product | FeS assembly protein SufD |
|---|
| Protein accession | YP_002361916 |
|---|
| Protein GI | 217977769 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.0238755 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTC CATTGACGCC GCCGCGCACG CCCGCCGAGG CTGCCCTCGC CGAAGCGTTC
GACGCCGCCC TGCCAGGCTT GCCCGGGGGC CCGGACGCGC GAAAATTGCG AGAGGCGGCG
TTCAGCAAGT TTTACGACGC CGGCCTGCCG CATCGGCGCA TCGAAGCGTG GCACTACACC
GATCTGCGCG CGCTGATGCG CACCGCCGCG CCGCTCGCCG AACCGGCTTC GGCTGAGGCG
CTCGCCGCAT TGCGCGAAAA ACTCGCCGCC TCCGCGCCGG GCCAGCGTCT CGTCGTCGTC
GACGGCGTGT TCGTCGCCGA ATTGTCGGAT CCGGCGCCGG AAGGCGTCGT CATCCAGTCG
CTCGCCTCGG TTCTCGCCGC CGGGCGTCCC GATTTGATCG CGCTGCTGGC GGCGCAGGAT
TTCGGCGGAA CCGACACGAT CGTCTCGCTC AACGCCGCGC TGATGCAGGA CGGCGTCGTC
ATCGAGGTCG CGCCCGGCGC CGTGGTCGCC GAGCCGATCC GCATCGTCTA CGCCTCGACC
GCGAGCGAGC CGCGCGCGTC CTATGCGCGC TCGGCGCTGA TCGTCGGCGC CGGGGCGTCG
GTTCGGCTGA TCGAGGATGA TTTCGGCGCG CAGGCGGCGC AGACCAATCG CTGCCTGGTC
GTATCGGTCG CCGACGACGC GGCCTGCGAC CACATCGTCT CGATGACGGG AATGGGCCGC
GCCAGTCTTC GCATCGAGAG CATGATCGTC CGCCTTGGCG CGCGCGTGAA GTTCAAGAGT
TTTGGGCTGA TCGGCGACGG CGGCGTCGTG CGCCGTCAGA TCTTCATGCG CTTCGACGGC
GCTGATTCCG AGGGGCTTCT CAGCGGCGTC TCTCTGCTGC GCGGCCGCGA GCACGCCGAC
ACGACCTTGC TGGTCGAACA TGCCGGCACG GGCTGCGCCG GGCGCGAGAC CTTCAAATAT
GTCCTCGACG AAGAAGCTGT CGGGGTGTTC CAGGGCAAGA TCACCGTCGA GAAAGAGGCG
CAGAAGACCG ACGGACGGAT GATGAGCAAG GCGCTGCTCC TGTCCGATGG CGTCGCCATG
AACAACAAGC CCGAGCTTGA GATCTTCGCG GACGACGTCG CCTGCGGCCA TGGCGCGACC
TGCGGCGGCC TCGACGAAAA TCAGCTTTTC TATCTGCAGA CGCGCGGCTT GCCCTTCGCC
GAGGCCGAGG CGCTGTTGCT CGAGGCCTTC GCCGCCGATC TCGTCGACGA ACTTCTCGAC
GAGGCCACCG GCGCCGAATT GCGCGAAAAG ATCGTGGGCT GGCTGTCGGC CAGAGGGACG
ACCCCAGTCA CGGGAGGTCC GGCATGA
|
|---|
| Protein sequence | MSAPLTPPRT PAEAALAEAF DAALPGLPGG PDARKLREAA FSKFYDAGLP HRRIEAWHYT
DLRALMRTAA PLAEPASAEA LAALREKLAA SAPGQRLVVV DGVFVAELSD PAPEGVVIQS
LASVLAAGRP DLIALLAAQD FGGTDTIVSL NAALMQDGVV IEVAPGAVVA EPIRIVYAST
ASEPRASYAR SALIVGAGAS VRLIEDDFGA QAAQTNRCLV VSVADDAACD HIVSMTGMGR
ASLRIESMIV RLGARVKFKS FGLIGDGGVV RRQIFMRFDG ADSEGLLSGV SLLRGREHAD
TTLLVEHAGT GCAGRETFKY VLDEEAVGVF QGKITVEKEA QKTDGRMMSK ALLLSDGVAM
NNKPELEIFA DDVACGHGAT CGGLDENQLF YLQTRGLPFA EAEALLLEAF AADLVDELLD
EATGAELREK IVGWLSARGT TPVTGGPA
|
|---|
| |