Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1454 |
Symbol | |
ID | 7091797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1572487 |
End bp | 1575636 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643464793 |
Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
Protein accession | YP_002361779 |
Protein GI | 217977632 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGTT TTTTCATCGA CCACCCGGTC TTCGCCTGGG TGCTGGCCAT CATCGTGATG CTGGCCGGCG CCGTCGCCGT CCTGACGTTG CCGATCGCGC AATATCCCAG CATCGCCCCG CCGGCGGTCT CCATCAGCGT CACCTATCCG GGCGCGTCGG CCGAGACGGT GCAGAGCACC GTGGTGCAGG TGATCGAACA GCAGCTCAGC GGCCTCGACC ATTTGCTGTA TTTCTCGTCC GAGAGCGACA AGGATGGCAG CATCACCATC ACTCTCAGCT TCGACCAGGG CACGAACCCG GATATCGCCC AGGTGCAGGT GCAAAACAAG CTGCAACTGG CGCAGCCGCG CCTGCCGCAG GCGGTGCAGC AACAGGGCAT CCAGGTGGCG AAAGCCACGA AGAACTTCCT TGTCGTGGTC GGCTTCGTAT CGACGGACGG GGCGATGACC TCCGCCGATC TCGGCGACTT CATCGCGTCC TCGATCCAAG ATCCGATCAG CCGGACCCCC GGCGTTGGCG ATTACCAGCT TTTCGGCTCG CAATACGCCA TGCGCATCTG GCTCGATCCA GCCAAACTGA ACAATTACGC CCTGACGCCT GGCGACGTCA GCGCGGCCAT CCAGGCGCAG AATGTCCAGG TGGCGGCCGG CGAACTCGGC GGGTTGCCCG CCGTCAAGAA CCAGCAGCTC AACGCGACCA TCATCGGGCC GTCCTATCTG CAGACGCCGC AGCAATTTGG CGAGATTTTG CTGCGGGTCG AGCCGACCGG CGCAAAAGTC CTGCTCCGCG ACGTGGCGCG GATTGAACTG GCCGGCGAAA GCTATTCCGT CGACACCAAA TACAATGGGC GTCCGGCTTC AGCCCTGGCG GTGAAGCTCG CCAGCGGGGC CAACGCGCTG GACACGGTGA AGGCGGTGCG CGCGACCATC GAACAGCTGC GGCCGAACTT CCCGTCTGGG GTGGAGGCGA TCTATCCATA CGACACCACG CCATTCGTGG AGCTTTCCAT CCATGGAGTG GTCGAGACGC TCATCGTCGC GGTCGTCCTC GTCTTCCTGA TCATGTATCT TTTTCTACAG AACCTGCGGG CGACGCTGAT CCCGACGATC GCCGTTCCTG TCGTGCTGCT CGGAACCTGC GCCATCCTGT CGCTGGCGGG ATTCTCGATC AACAGTCTGA CGATGTTCGG CATGGTGCTC GCCATCGGTC TTTTGGTCGA CGACGCGATC GTTGTCGTCG AGAATGTCGA ACGCGTGATG GAGGAAGATC ATCTCTCTCC CAAGGAAGCC ACGCGCAAAT CGATGGACGA GATCTCGGGC GCGCTGGTCG GCATCGCGCT GGTGCTGACG GCGGTCTTCC TGCCAATGTC GTTCTTCGGC GGATCCACCG GCGTCATCTA CCGGCAGTTC TCCATCACAA TCGTCTCGTC CATGATCTTA TCGGTGCTGG TCGCGCTGGT CTTCACGCCA GCCTTGTGCG CGACCATCCT GAAGCGCCCA AAGGAAGGCG GCAAGCGCGG CTTCTTCGGC TGGTTCAACC GCAATTTCGA TCGCGGCAAC CGCAGATATG TCGGCGTGGT GAAGCTGGCG ATCGCTCATC CGATTCTATC CATGTTGGCG TTCGTCGGCG TCACGACCGT GCTGGTTCTC GTGTTCGTAC GCATACCCAG CGGATTTCTG CCGGACGAGG ACCAGGGCGT GATGTTCGCG CAGGTCGTCG CCCCGCCCGG CGCCACCAGC ATAAGAACGC AACAGGTTCT GGACGAGGTC TCGGATTATC TGCGCACGGA CGAATCTCAT AACGTCGAGG GCGTCTTCGA AGTTAACGGA TTCAGCTTCG GCGGACGCGG CCAGAACGCC GGCCTGATCT TCGTCAAACT GAAGGATTGG AGCGAGCGGC CGGGCGAGCA GAACAAGGTC CAGGCGATCG CCGGACGCGC CATGGCGCGG TTCGGAGAGA TCAAGGACGC GCGGGTGTTC GCTTTCGCGC CCCCCGCCGT GCTGGAGCTC GGCAATGCGA CCGGTTTCGA CTTCCAGATC CTGGACCGCG CCAATCTCGG CCACGACAAG CTGATGCAGG CTCGCAACCA GCTGTTGGCG GAGGCCGCCA AGGATCAACG GTTGGTCGCC GTGCGACCCA ATGGAATCGA TGACGAACCG CAATATACCA TCGTCATCGA CAGGGAGAAA GCGAACGCGC TAAGCCTGAG CATCGCCGAC ATCAACACCA CTCTGTCGGC GGCCTGGGGG TCGGCCTACG TGAACGATTT CATCGATCGC GGCCGAGTAA AGCGGGTCTA CATGCAGGGC GACAGCCATT CGCGGATGCT GCCCGATCAG CTCGACAGCT GGTACGTGCG CAACAAGCTC GGCCAGATGG TGAAGTTCTC ATCCTTCGCG GCAGGGCGCT GGACCTATGG CTCGCCGAAG CTCGAACGGT ATGGCGGCGT CCCATCGATC GAAATCATGG GTTCGCCGGC GCCGGGCCAG AGCACGGGCG CCGCAATGGA GGCGATGAAG GAAATCGCCA GCAAGCTGCC GCCGGGATTT GGCTATGATT GGACAGGATT GTCCTACGAG GAGGTGAAAT CCGGATCGCA GACAGGACTG CTCTACGCCG GCTCGCTGAT CGTCGTCTTC CTCTGCCTTG CCGCATTGTA CGAAAGCTGG TCGATCCCGG TCGCCGTTCT GCTTGTCGTG CCGCTTGGCG TCGTCGGCGC GGTTCTGGCC ACCTTCTTCC GTGGACTGAA CAACGACGTT TATTTCCAGG TTGGCCTGCT GACGACGATC GGCCTCGCCT CAAAAAACGC GATCCTGATC GTTGAATTCG CCAAGGCGAA TTTCGAGGCG GGCGAGGATC TGGCCGAGGC GGCGGCGATC GCCGCGCGAG AGCGGCTGCG GCCGATCCTG ATGACCTCGC TGGCCTTTAT TCTGGGCGTG GCGCCCTTGG CGATCTCCAC CGGCGCGGGC TCCGGCGGCC AGAACGCCAT CGGCACCGGA GTCGTCGGCG GCATGATCTC CGCCACGGTT CTGGCGATCG TTCTGGTTCC GGTGTTCTTT GTCGTCGTCT TGCGCCTGTT CAAGGTGAAA CGCTTGAATC ATGAGGAACA TGCGACGGCG CGGGACCTTC AGCCGGCGAC CGAGCCATGA
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Protein sequence | MSRFFIDHPV FAWVLAIIVM LAGAVAVLTL PIAQYPSIAP PAVSISVTYP GASAETVQST VVQVIEQQLS GLDHLLYFSS ESDKDGSITI TLSFDQGTNP DIAQVQVQNK LQLAQPRLPQ AVQQQGIQVA KATKNFLVVV GFVSTDGAMT SADLGDFIAS SIQDPISRTP GVGDYQLFGS QYAMRIWLDP AKLNNYALTP GDVSAAIQAQ NVQVAAGELG GLPAVKNQQL NATIIGPSYL QTPQQFGEIL LRVEPTGAKV LLRDVARIEL AGESYSVDTK YNGRPASALA VKLASGANAL DTVKAVRATI EQLRPNFPSG VEAIYPYDTT PFVELSIHGV VETLIVAVVL VFLIMYLFLQ NLRATLIPTI AVPVVLLGTC AILSLAGFSI NSLTMFGMVL AIGLLVDDAI VVVENVERVM EEDHLSPKEA TRKSMDEISG ALVGIALVLT AVFLPMSFFG GSTGVIYRQF SITIVSSMIL SVLVALVFTP ALCATILKRP KEGGKRGFFG WFNRNFDRGN RRYVGVVKLA IAHPILSMLA FVGVTTVLVL VFVRIPSGFL PDEDQGVMFA QVVAPPGATS IRTQQVLDEV SDYLRTDESH NVEGVFEVNG FSFGGRGQNA GLIFVKLKDW SERPGEQNKV QAIAGRAMAR FGEIKDARVF AFAPPAVLEL GNATGFDFQI LDRANLGHDK LMQARNQLLA EAAKDQRLVA VRPNGIDDEP QYTIVIDREK ANALSLSIAD INTTLSAAWG SAYVNDFIDR GRVKRVYMQG DSHSRMLPDQ LDSWYVRNKL GQMVKFSSFA AGRWTYGSPK LERYGGVPSI EIMGSPAPGQ STGAAMEAMK EIASKLPPGF GYDWTGLSYE EVKSGSQTGL LYAGSLIVVF LCLAALYESW SIPVAVLLVV PLGVVGAVLA TFFRGLNNDV YFQVGLLTTI GLASKNAILI VEFAKANFEA GEDLAEAAAI AARERLRPIL MTSLAFILGV APLAISTGAG SGGQNAIGTG VVGGMISATV LAIVLVPVFF VVVLRLFKVK RLNHEEHATA RDLQPATEP
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