| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1202 |
|---|
| Symbol | engB |
|---|
| ID | 7092275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1288139 |
|---|
| End bp | 1288819 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643464543 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_002361533 |
|---|
| Protein GI | 217977386 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0025495 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGACA TTGACCCGGC TCCCGTTGCG GCGCTCGCCG ACTTCAACGA GGTCGGCCGC
AAATTATTCG CCGCCGAATG TGATTTCCTC TGGGCGGCGA GCTCGGTCGC CAGCCTGCCG
CCGCCGGGCG CGCCGGAAAT CGCTTTCGCC GGCCGCTCCA ATGTCGGCAA ATCCTCGCTG
CTCAATGCGC TGACCAACCG CAAGAGCCTG GCGCGCACCT CGCATACGCC CGGCCGCACG
CGCGAACTCA ATTTCTTTGG GCTTGGCGGC GGCATCGACG ACGCCAGGCT GCGGCTCGTC
GACATGCCGG GCTATGGCTA TGCCGCCGCC TCGAAGGAGC AGATCGCCTC CTGGACGCAG
CTGATGCAGG ATTATCTGCG CGGCCGCGCG CCGCTCTTGC GCGCCTTCGT GCTGATCGAC
GGGCGCCATG GCCTGAAGCC GCCGGATTAC GAGATGATGG ATCTGCTCGA CCGCTGCGCC
CTCTCCTACC AGATCGTGCT GACCAAGCAG GACGAGGTGA AGGAGGCCGA CGCCGCGCGC
CGCATCGAGG AAACCCTGAA GGCGATCGAG AAGCGTCCGG CCGCCTATCC GCAGGCGATC
TTCACCTCGT CGCGGACGGC GGACGGCGTC GCCGAGCTGC GCGCCGCCAT CGCCAGGCTG
CTGGCCGAGC ACGGCCATTG A
|
|---|
| Protein sequence | MSDIDPAPVA ALADFNEVGR KLFAAECDFL WAASSVASLP PPGAPEIAFA GRSNVGKSSL
LNALTNRKSL ARTSHTPGRT RELNFFGLGG GIDDARLRLV DMPGYGYAAA SKEQIASWTQ
LMQDYLRGRA PLLRAFVLID GRHGLKPPDY EMMDLLDRCA LSYQIVLTKQ DEVKEADAAR
RIEETLKAIE KRPAAYPQAI FTSSRTADGV AELRAAIARL LAEHGH
|
|---|
| |