| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1153 |
|---|
| Symbol | |
|---|
| ID | 7093916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1239076 |
|---|
| End bp | 1239921 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643464494 |
|---|
| Product | Indole-3-glycerol-phosphate synthase |
|---|
| Protein accession | YP_002361484 |
|---|
| Protein GI | 217977337 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0134] Indole-3-glycerol phosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.000666222 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATC CAGCAAATTA TTCCGCCGTC GGCCCGCGTT TGAAGCCCCT CCTGGAGCAG
CGCCAGGCCG ATGTCGAAAA GGCCAAGGTC AAGCGCTCCG GCGGCAGCCT GACCGGCGCC
ATCGGCGAGG CGGCCAAGAC GGCCGGCTTT CGCGCCGCGC TGTTCCATCA TTTCGCAACG
ACCGGCCGGC CCGGCGTCAT CGCCGATATC CAGGGCGCCT CGCCCTTGAC GAAGGTGACG
CGCTCGCGCC TCGACGTCCG CGACCTCGCC GAGGATTTTC GCGACGCGGG CGCGGTCTGC
ATTTCAGCCG CGCAGGATCG CCGTCTCTAT CGCGGCAGCC TCGCCGATTT CACCGCGGCC
AAGGTCGCCA AACTGCCGAT CCTCGCCAAT GATCTCGTCG TCGACCAATA TCAGATCATC
GAGGCGCGTT ACGCCGGAGC CGACGCCATT GTGCTGATCG TCGGGGTGCT TGGCCGCCAG
CTCGGCGATT TTCTGGCGCG GGCCGACTCC GTCCTGCTCG ATTGCCTCGT CGACGTGCGC
AATGAGGCCG AGCTCGAAAT CGGGCTGGAG GCCGGGGCGA ATCTGATCGG CGTCAACAAC
CGCGATCTCG AGACGATGGA GGTCGACCCG TCGATTTGCG AAAGGCTCAT TCCGCAAATC
CCGCTCGACC GGGTGCTCGC GGTGGCCTCG GGCGGCCTCA AATCTCTTGA AGATATCAAC
CGGATGAAGG ATTTGGGCGC CAAGGCCGTG CGCATCGCCG GCGCGCTGAT GGAGGCGCGC
GATCCTTACG AGACGCTTCA CCAGCTGCTT GGAACGACGC CGCCCGAGGA GCTGGAAGAG
GGCTGA
|
|---|
| Protein sequence | MSDPANYSAV GPRLKPLLEQ RQADVEKAKV KRSGGSLTGA IGEAAKTAGF RAALFHHFAT
TGRPGVIADI QGASPLTKVT RSRLDVRDLA EDFRDAGAVC ISAAQDRRLY RGSLADFTAA
KVAKLPILAN DLVVDQYQII EARYAGADAI VLIVGVLGRQ LGDFLARADS VLLDCLVDVR
NEAELEIGLE AGANLIGVNN RDLETMEVDP SICERLIPQI PLDRVLAVAS GGLKSLEDIN
RMKDLGAKAV RIAGALMEAR DPYETLHQLL GTTPPEELEE G
|
|---|
| |