Gene Msil_1147 details

Gene Information

• Locus tag: Msil_1147
• ID: 7093910
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 1230962
• End bp: 1231567
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643464488
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_002361478
• Protein GI: 217977331
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.00108201
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGACAAAT TCACCTCGCT CACCGGCGTC GCCGCGCCGC TCAAGATCAC CAATGTCGAC 
ACCGACATGC TGATCCCGAA GCAATATCTG AAGACGATCA AGCGCACCGG TCTCGGCAGC 
GGGCTCTTCG CGGAATTGCG TTATCGCGAG GACGGCTCTG AAAATCCCGA TTTCGTGCTG 
AACAAGCCGG CCTATCGCAA GGCGTCGATT CTCGTCGCCG GCGACAATTT CGGCTGCGGC 
TCCTCGCGCG AACATGCGCC CTGGGCGCTG CTCGACTTCG GCATCCGATG CGTGATCGCG 
ACGAGTTTTG CCGATATTTT CTATAATAAT TGCTTCAAGA ACGGCATCCT GCCCATTGTC 
GTTTCGCCGG AAGAGCTGGA AAAACTGATG GACGACGCCG AGCGCGGCGC GAACGCGACC 
TTGTCGATCG ATCTCGACGC GCAGGAAATC CGCGGCCCCG ATGGCGGGCG CATCCGATTC 
GAGATCGACC CGTTCCGCAA GCATTGTCTT TTGAACGGCC TCGACGATAT CGGACTGACG 
CTGGAAAAAG GCGTTCATAT CGACGCGCAT GAACAAAAAA TTGAAGGGCG CCGGTCGTGG 
TTGTAG 

 

Protein sequence

MDKFTSLTGV AAPLKITNVD TDMLIPKQYL KTIKRTGLGS GLFAELRYRE DGSENPDFVL 
NKPAYRKASI LVAGDNFGCG SSREHAPWAL LDFGIRCVIA TSFADIFYNN CFKNGILPIV 
VSPEELEKLM DDAERGANAT LSIDLDAQEI RGPDGGRIRF EIDPFRKHCL LNGLDDIGLT 
LEKGVHIDAH EQKIEGRRSW L