| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1123 |
|---|
| Symbol | |
|---|
| ID | 7093886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1209894 |
|---|
| End bp | 1210538 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643464464 |
|---|
| Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
|---|
| Protein accession | YP_002361454 |
|---|
| Protein GI | 217977307 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.41525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATATC AACACACCGA CGCGACGCTT GCCTTGATGA AGCGCTCGCC GGTGATTCCG
GTCATGCAGG TGATCGATGC TGCTGACGCG CTGGCGCAGA CCGAGGCGCT GCTCGCCGGC
GGCCTCAGCG TGCTCGAAAT CACGCTGCGG ACCCCCGCCG CGCTCAAATC GATCGAGATG
CTGTCGCGCG CCTTTCCGGA GGCCGCGATC GGCGCCGGAA CGGTCACCAA CGCCGATCAG
ATGGAAGCCG CCATCGACGC CGGCGCGTCC TTTCTCGTCA GTCCCGGCAT GACGCGCAAG
CTGCTACGGT CGGCGCGCAA ATCCCCGGTG CCGTTTCTTC CCGGCATCGC CACGGCGACC
GAAGCGATGA CGCTCTATGA GCGCGGCTTC CGCTGCATGA AATTCTTTCC GGCCGAGCCC
GCCGGCGGCG CGAAATATCT CTCGTCGCTG AGCGGTCCTT TGCCCGACCT CGTCTTCTGC
CCGACCGGCG GCATCGATAT CGTCAAGGCC AAGGCCTATC TCGAACTCAA GAATGTCGCC
TGCGTCGGCG GCTCCTGGAT GGTCGCGCCC GCGCTGATCA AGGCGGGCGA CTATGCCGCC
ATCGAAAAGC TCGCCAGGGA AGCCGCAGAG CTGCGGGCGG CCTGA
|
|---|
| Protein sequence | MAYQHTDATL ALMKRSPVIP VMQVIDAADA LAQTEALLAG GLSVLEITLR TPAALKSIEM
LSRAFPEAAI GAGTVTNADQ MEAAIDAGAS FLVSPGMTRK LLRSARKSPV PFLPGIATAT
EAMTLYERGF RCMKFFPAEP AGGAKYLSSL SGPLPDLVFC PTGGIDIVKA KAYLELKNVA
CVGGSWMVAP ALIKAGDYAA IEKLAREAAE LRAA
|
|---|
| |