| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0957 |
|---|
| Symbol | |
|---|
| ID | 7093636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1044511 |
|---|
| End bp | 1045149 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643464296 |
|---|
| Product | transglutaminase family protein cysteine peptidase BTLCP |
|---|
| Protein accession | YP_002361288 |
|---|
| Protein GI | 217977141 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3672] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00236078 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCT GGAGCGGGAG AAGGCGGGGG GCGACGAAGC TTTTTTCGTC CGCGTTAATC
TCTCTCTCCA TGATGACCTC AGGCGCTTTC GCCGTGGGCG CGACAAACTC AGCCTCTTTC
ATGCCGATCG GATCGGTCAC CAGCGTGCCT TTCGGATGGG CCGACTTCTG CCGCCGCTAT
CAGGGCGTGT GTGACGGCGG CGCAATCGAG CCGCTCGACG TTGTCGCCGC GCCAAAGACA
ATGAGAGAGA TCGAGCGCGT CAACAAATGG GTCAACGCCC ATATCGTCGC GATCACCGAC
AAGGAGCATT GGGGCGTCCT CGACCAATGG GACTATCCCG CCGACGGGAA GGGCGATTGC
GAGGATTTCG CGCTGCTCAA GCGCAAGATC CTTATCGAAG AAGGCTTTCC CCGCCAGGCT
CTCCTCATGA CTGTCGTCAA GGACCAGAGC AACGAAGGCC ATGCGGTGCT GACGATCAAG
ACCAGCAACG GCGACTTCGT GCTCGACAAT CTCGCGCCCG ACGTGAAGTC ATGGAGCCGC
ACGCCCTACC GCTTCGTCAA GCGCCAGTCC CAGGCCGATC AGAATGTCTG GGTTCAAATC
GGCGATCCCA CGGCCGAGCC CGACTATGTG TCGCGCTGA
|
|---|
| Protein sequence | MKSWSGRRRG ATKLFSSALI SLSMMTSGAF AVGATNSASF MPIGSVTSVP FGWADFCRRY
QGVCDGGAIE PLDVVAAPKT MREIERVNKW VNAHIVAITD KEHWGVLDQW DYPADGKGDC
EDFALLKRKI LIEEGFPRQA LLMTVVKDQS NEGHAVLTIK TSNGDFVLDN LAPDVKSWSR
TPYRFVKRQS QADQNVWVQI GDPTAEPDYV SR
|
|---|
| |