| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0675 |
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| Symbol | rpsA |
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| ID | 7093756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 734789 |
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| End bp | 736537 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643464010 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002361009 |
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| Protein GI | 217976862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.690527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAA CTTCCACCTA TGCGCCGACG CGCGAGGATT TCGCGGCGCT TCTCGACGAG
AGCTATGGCG ACAACGAGGC TTTTGAAGGC TCGGTCGTCA AAGGCACCGT CGTCGCTATT
GAAAAAGACG TCGCCGTCAT TGACCTCGGC CTCAAGACCG AGGGACGCGT CGCCCTTAAG
GAATTTCAGG GTCCGAACCG CGAAGGCGCG CCCGTCGTCG GCGACGTCGT CGAGGTCTAT
CTCGAGCGCA TCGAGAATGC GCTGGGCGAG GCCGTCATCT CGCGCGACAA GGCCCGCCGC
GAAGAGAGCT GGGTCAAGCT CGAAAAGGCT TTCGAGAAGC AGGAAAAGGT TGAGGGCGTC
ATCTTCAACC AGGTCAAGGG CGGCTTCACG GTCGACCTCG ACGGCGCCGT CGCCTTCCTG
CCGCGCAGCC AGGTCGATAT TCGCCCGATC CGCGACGTCA CCCCGCTGAT GGGCGTGCCG
CAGCCGTTCC AGATCCTGAA AATGGATCGC CGCCGTGGCA ATATCGTCGT GTCGCGCCGC
ACCGTGCTTG AAGAATCCCG CGCCGAACAG CGCCATGAGA TCGTCGCCAA CCTCGAAGAG
GGGCAGGTGA TCGAAGGGAT GGTCAAGAAC ATCACCGATT ACGGCGCCTT CGTCGACCTC
GGCGGCATCG ACGGCCTGCT GCATGTGACC GATATCGCCT GGCGCCGCGT CAACCATCCG
ACGGAAGTTC TGTCGATCGG ACAGACGGTT CGCGTCAAGA TCATCAAGAT CAACCACGAC
ACCCACCGCA TCTCGCTCGG CATGAAGCAG CTGCTCGAAG ATCCGTGGCA GGGCATCGAG
GCGAAATATC CGGTCGATGC GCGCTTCCGC GGCCGCGTCA CCAACATCAC CGACTACGGC
GCCTTCGTCG AACTTGAGCC GGGCATCGAG GGACTGATCC ACGTCTCCGA AATGTCCTGG
ACCAAGAAGA ACGTGCATCC CGGCAAGATC GTCGCGACGA GCCAGGAAGT CGACGTTCAG
GTGCTCGAGG TCGATCCGGT CAAGCGCCGC ATCTCGCTCG GCCTCAAGCA GACTCTCGCC
AATCCGTGGG AGTCCTTCGC CGAGAAATTC CCAGTCGGAT CGGAAGTCGA GGGCGAAGTT
AAGAACAAGA CCGAATTCGG CCTGTTCATC GGCCTCGACG GCGACGTCGA CGGCATGGTC
CACCTCTCCG ACCTCGACTG GAAGAAGCCC GGCGAGCAGG CGATCGAGGA CTATAAGAAG
GGCGACATCG TCCGCGCCAA GGTGCTCGAC GTCGATATCG AAAAGGAGCG CATCTCGCTC
GGCGTGAAGC AGCTCGGCGG CGACGTCGTC GCGCCGGCCG CTGAAGGCGC TCCGAAGCCG
ACTGACGATC CGTCCGACCT CAAGAAGGGC GTTGTCGTCA CCTGCGAGAT CATGGACGTC
AAGGACGGCG GCCTCGATGT TCGCATCGTT GGCACAGACT TCACCGCCTT CATCAAGCGC
AACGAGCTGG CGCGCGACCG CGCCGATCAG CGTCCGGAGC GTTTCGCCGT CGGCGAGAAG
GTCGATGCGC GCATCACCCA GTTCGATCGC CGCACCCGCA AGGTGACGGT GTCGATCAAG
GCGCTCGAAG TTGCGGAAGA GAAGGAAGCC ATCGCGCAAT ATGGCTCCGC CGATTCCGGC
GCCTCGCTCG GCGACATCCT TGGCGCGGCC CTGAAGGCCC GCGAAAAGGG CGGCAAGGCC
GAAGACTAA
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| Protein sequence | MASTSTYAPT REDFAALLDE SYGDNEAFEG SVVKGTVVAI EKDVAVIDLG LKTEGRVALK
EFQGPNREGA PVVGDVVEVY LERIENALGE AVISRDKARR EESWVKLEKA FEKQEKVEGV
IFNQVKGGFT VDLDGAVAFL PRSQVDIRPI RDVTPLMGVP QPFQILKMDR RRGNIVVSRR
TVLEESRAEQ RHEIVANLEE GQVIEGMVKN ITDYGAFVDL GGIDGLLHVT DIAWRRVNHP
TEVLSIGQTV RVKIIKINHD THRISLGMKQ LLEDPWQGIE AKYPVDARFR GRVTNITDYG
AFVELEPGIE GLIHVSEMSW TKKNVHPGKI VATSQEVDVQ VLEVDPVKRR ISLGLKQTLA
NPWESFAEKF PVGSEVEGEV KNKTEFGLFI GLDGDVDGMV HLSDLDWKKP GEQAIEDYKK
GDIVRAKVLD VDIEKERISL GVKQLGGDVV APAAEGAPKP TDDPSDLKKG VVVTCEIMDV
KDGGLDVRIV GTDFTAFIKR NELARDRADQ RPERFAVGEK VDARITQFDR RTRKVTVSIK
ALEVAEEKEA IAQYGSADSG ASLGDILGAA LKAREKGGKA ED
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