| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0662 |
|---|
| Symbol | |
|---|
| ID | 7093743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 715225 |
|---|
| End bp | 716682 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643463997 |
|---|
| Product | rfaE bifunctional protein |
|---|
| Protein accession | YP_002360996 |
|---|
| Protein GI | 217976849 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR02198] rfaE bifunctional protein, domain I
[TIGR02199] rfaE bifunctional protein, domain II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.148803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCA TCATCGACCG TTTCGCGAAA TGCCGCGTCG CGGTGATCGG CGATTTGATC
CTCGACTGTT ATCTTCAGGG CGACGTCAGC CGGATCTCGC CCGAGGCGCC GGTTCCAATC
GTGCGCTCCC TGTCCGAACG ATCCGTGGCA GGCGGCGCCG CGAATGTCGT CGCCAATCTG
GCGACCCTTG GCGCGACAGT CGACGTCGTC GGGCTGACGG GCCTCGATAG CGCGCGGGAC
GATTTGATTT CGTGCCTTCA GACCCATGGC CGGGTCGATC TGACCGGCCT CATCGGCGTC
GCGGACCGTC CGACCACCCG CAAATTGCGC ATTCTGGGCG CGCATCAGCA GATCGTGCGC
GTCGATCAGG AAGACACCTC GCCCTATGAC GATCTTGTCG AACAGCGGCT GATCGCCGCC
GCCGCCGCCG CCGCCGATCG CGCCGACATC GTCATCCTGT CGGATTACGG CAAGGGCGCT
TTGTCCTTGC GGGTGCTGCG CGAGATCATC GATCGCTGCA ACGCCACGCA AAAGAAAGTT
CTGGTCGATC CAAAGCGCCT CGACCTCACC GCCTATCGCG GAGCGACCAT CATCACGCCG
AACCGCAAGG AGCTCGGCGC CGCGACGCGG CTTCCCTGCG ACACGGATTC GCAGGCGCTT
GCCGCAGCGA TCCAGGCGCA GGAGTTAACC GAATCCAACA TCCTGCTGAC GCGGTCGGAA
AAAGGCATGT CCTTCTTTCC GCTGTCAGGA CCGCCGATCC ACCTCGCGAC GGTGGCGCAG
GACGTGTTCG ACGTGTCCGG CGCCGGCGAT ACGGTGATCG CGGTGCTCGG AGCCTCGCTG
GCCTCTGGGC TTTCCATGCT GGAATCGATG AAACTCGCCA ACCATGGCGC CGGCATTGTC
GTCGCCAAGG TCGGCACCGC CTGCGTCACG CCGGAGGAGC TTGCCGCCTC GCTTGGCTCC
GAGCTCGCCT CGGCCTCCGT CAATGACGGG CGCCACATCA CGGCGGAGGA CGCCGTCGCG
CAGCGCTGGG CCTGGGCCAA GGAGAAGCTC ACGGTCGGCG TCGCCAACGG CTGTTTCGAT
CTGCTGCATC CGGGTCATAT TTCGCTCATC AAACAGGCCG CCGCGAGCTG CGACAGGCTG
ATCATGGCCC TGAATTCCGA CGCCTCCGTG CGCCGCCTCA AGGGGCCGAC CCGGCCGATC
CAGGACGAGG AATCGCGCGC CGCCGTAATA GGCGCCCTGA AGGGCGTCTC CGCGGTCGTG
CTGTTCGACG AAGACACGCC GTTCAATCTG ATCAAGGCGC TGCAGCCGGA TATTCTGGTG
AAAGGCGCCG ATTACAGCGA GGATCAGGTC GTCGGCGGCG ACATCGTCAA GGCGCGCGGC
GGGCGGATCG TGCTGGCGCA GCTCTCGCCC GGCCAATCGA CCACCCAGCT CGTCAAGAAG
GCCGAGCTGA CGCATTAA
|
|---|
| Protein sequence | MIPIIDRFAK CRVAVIGDLI LDCYLQGDVS RISPEAPVPI VRSLSERSVA GGAANVVANL
ATLGATVDVV GLTGLDSARD DLISCLQTHG RVDLTGLIGV ADRPTTRKLR ILGAHQQIVR
VDQEDTSPYD DLVEQRLIAA AAAAADRADI VILSDYGKGA LSLRVLREII DRCNATQKKV
LVDPKRLDLT AYRGATIITP NRKELGAATR LPCDTDSQAL AAAIQAQELT ESNILLTRSE
KGMSFFPLSG PPIHLATVAQ DVFDVSGAGD TVIAVLGASL ASGLSMLESM KLANHGAGIV
VAKVGTACVT PEELAASLGS ELASASVNDG RHITAEDAVA QRWAWAKEKL TVGVANGCFD
LLHPGHISLI KQAAASCDRL IMALNSDASV RRLKGPTRPI QDEESRAAVI GALKGVSAVV
LFDEDTPFNL IKALQPDILV KGADYSEDQV VGGDIVKARG GRIVLAQLSP GQSTTQLVKK
AELTH
|
|---|
| |