Gene Msil_0563 details

Gene Information

• Locus tag: Msil_0563
• Symbol: rpsE
• ID: 7091626
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: -
• Start bp: 621223
• End bp: 621792
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643463895
• Product: 30S ribosomal protein S5
• Protein accession: YP_002360897
• Protein GI: 217976750
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 55
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGCGTG AGGGTGAAGG CGGCCGTGGC CGCGACCGCG AGGAGCGCGA CAGCGAATTC 
ATGGACCGCC TGGTCCATAT CAATCGCGTC GCCAAAGTGG TGAAGGGCGG CCGCAGGTTC 
GGTTTCGCCG CGCTCGTCGT CGTCGGCGAC CAGAAAGGCC GCGTCGGCTT CGGCCATGGC 
AAGGCCCGCG AGGTGCCGGA AGCGATCCGC AAGGCGACCG AGTCGGCGAA GCGTTCGCTG 
ATCCGCGTGC CGCTGCGCGA GGGCCGCACG CTGCATCATG ACGTCAATGG ACGCCATGGC 
GCGGGACGCG TCGTTTTGCG CGCGGCCCCG GCCGGCACCG GCATCATCGC CGGCGGTCCG 
ATGCGCGCCA TTTTCGAGAC GCTCGGCATG CATGACGTCG TCGCCAAGTC GCAGGGCTCG 
TCCAACCCTT ACAACATGGT GCGGGCGACG TTCGACGCGC TTGGCCGGCA GGATTCGCCG 
CGCGCCGTCG CTGCGCGGCG CAACCTTAAA GTGTCCGTTC TGCAGGGTCG CCGTCCGGGC 
GGCGAGGCAG AAGCCGCAAG CGAAGCCTAA 

 

Protein sequence

MAREGEGGRG RDREERDSEF MDRLVHINRV AKVVKGGRRF GFAALVVVGD QKGRVGFGHG 
KAREVPEAIR KATESAKRSL IRVPLREGRT LHHDVNGRHG AGRVVLRAAP AGTGIIAGGP 
MRAIFETLGM HDVVAKSQGS SNPYNMVRAT FDALGRQDSP RAVAARRNLK VSVLQGRRPG 
GEAEAASEA