| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0465 |
|---|
| Symbol | |
|---|
| ID | 7091197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 515306 |
|---|
| End bp | 517582 |
|---|
| Gene Length | 2277 bp |
|---|
| Protein Length | 758 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643463795 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002360800 |
|---|
| Protein GI | 217976653 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG CCTGTCCGCG TTCGCCCGCG CCGATGGAAT TCGCCATGAC CCCCCTTCAC
GCCGCATCCT TCCGCGACGC GCTGCGCGCG ACGACCTCGC TTGCCCATCC CCTGCTTCCG
CTGATCTGCC TCGGGCCGCT CTGCGCGGCG CCGGCGCTCG GCCAGACCGC GCCGAGTCTT
CCTACCGTCA TCGTCGAGCC GGCCGCGCCC GGCGATGGCG GCGCGACTTC CGCATTGGCC
GGTCTCATGC CGGCCAGCGC CTCCTTGATT TCCGGCGCGT CCGCAAGGAG CTCCGAGCTC
TGGACCAGCG ACTCGGGCGC GCTGATCTGG GATACGCCCG GCGGCTCGGC CTGGGGCGCC
GGCGGCGTAT CGAGCCTGCC GGCCATCAAC GGCATGGGCG CCGATCGCGT GCAAACGACG
GTCAACGGGA TGATTTTCGC CCCCGCCTGC CCGAACCAGA TGAACCCGCC CCTTTCTTTT
GTGAATCCCG CCATGATCGC CAGCGCGCAG GTCTACACCG CCGCGGCTCC CGTCAGCGTC
GGAGGAGACT TCACCGGCGG CAAGATTGTG ACAAAAACTG CGCCGCCGAT TTTCGTGTCG
GGCCCGGATA TCATCACGAG CGGAAATGTG TCCGGCTTCA TCCGCTCGAA CGGCCTCGCC
TATGGCTCCA GCATCGACAC GACGATCTCG AATTACGACA CGAGCCTTGC CTTCGCCGGC
GGGTTCGCGC GCTCCGGCGA CTATACAGCC GGCGACGGGA CCAAGATCAA GTCGACGCTC
TATGAGACGA TGAATTACGC GCTCAGCCTT TCAAAGAAGG TGCAGGACGG TTTCTTCACG
CTGCAGATAG GCGGCCAGGC GATCCCCTAT CAGGGCTTCG TCAACCAGTA CATGGACATG
GTCGACAACC ACAGCGTCTA CCTCAACGGT CACTACGAGG GCGCGTTCAG CTGGGGCGGC
CTCGACGCCA CGGCCTATGG CAATTACATC CGCCACACCA TGGGCTTTCT GCCGCCGGAC
AAGACCGGAG ACATGCCGAT GGACACTAGG AGCATTGACG CGGGCTATTC GGTCAAGGGA
ACCGTCGTCA TCGACGCGCA GGATCTTCTG CGCGTCGGCA ACGAGCTCGC CTACAATAAT
CTCGATGACT GGTGGCCGCC GGTCAGCGGC TCTATGATGA TGGGGCCGGA TACATTCATC
AACATCAACA ATGGGCAGCG TACGCGAATC GGCTCCTTCG CGGAATGGGA GCGCCGCTGG
AACGGCGCGT GGACGACCGT TCTTGGCGCG CGCAACGACG TGGTGGCGAT GAATACGGGC
GACGTTCAGG GCTACGATGC GATGATGTAT GGCGCCGATG CGGCCGCCTT CAACGCCCAG
AACCACGCCC GCACCGACGT GAATTTCGAC GGTTCCGCGC TGGTCCGCTT CGACCCAGAT
CCCGGCAGCC GTTACGAGCT CGGCTTCGCC CACAGGGCGC GTTCGCCCAA TCTCTACGAA
CGCTACGCTT GGTCCACGAA CGTGATGGCG ATGCAGATGA TCGGCTGGTT CGGCGACGGC
AACGGCTATG TCGGCGACAT CAACCTCAAG CCGGAGGAGG CCAACACCGT GAGCCTCACG
GCGACATGGC GCGATCCCGA CAAGGCCGCG TGGGAGCTCA GGGCGACGCC TTACTACAGC
TATGTCGCGA ATTATATCGA CGCCGACCGC TGCGCCCTTG CCGGCTGCCT CGCCAATCTG
GCGACCAATC TGACGACGAC GGATAATTTC GTCTATCTCC AGTTCGCCAA CCACAACGCC
TGGCTCTATG GCGTCAATCT GGATGGCAAG CTCAACCTCT GGGATACCCC GGAATTCGGC
CAGGGCCGCG TTCGCGCCAA CTTCAATTAT GTGCGCGGCC AGCGCACTGA CGGGATCGAT
CTCTATCACA TCATGCCGGT CAATGTGACG CTGGCGCTCG ATCAGGCCTA TGGCGGATGG
ACATCGAGCA TAGAGGTTCA GATCGTCGGT TCGAAGACGC TGGTGAGCCA GGTCCGCAAC
GAGCTCGAAA CCTCGAATTA CGCGTTGCTC AACCTGCGCC TCGGCTATCA GTGGGATGCG
GTGAAAGTCG ATTTCGGAAT CGAGAACGTG CTCAATGCCA ACTACTTCCT ACCGCTCGGC
GGCGCCAATC TCGTCAACTA CCAGACCACC TCGATGATGG GGACGGCGAC GGCATGGGGC
TTCCCCGTCG CGGGCCTCGG GCGGTCCTTC AACGGGCGCA TTTCCGTGCG GTTCTGA
|
|---|
| Protein sequence | MSRACPRSPA PMEFAMTPLH AASFRDALRA TTSLAHPLLP LICLGPLCAA PALGQTAPSL
PTVIVEPAAP GDGGATSALA GLMPASASLI SGASARSSEL WTSDSGALIW DTPGGSAWGA
GGVSSLPAIN GMGADRVQTT VNGMIFAPAC PNQMNPPLSF VNPAMIASAQ VYTAAAPVSV
GGDFTGGKIV TKTAPPIFVS GPDIITSGNV SGFIRSNGLA YGSSIDTTIS NYDTSLAFAG
GFARSGDYTA GDGTKIKSTL YETMNYALSL SKKVQDGFFT LQIGGQAIPY QGFVNQYMDM
VDNHSVYLNG HYEGAFSWGG LDATAYGNYI RHTMGFLPPD KTGDMPMDTR SIDAGYSVKG
TVVIDAQDLL RVGNELAYNN LDDWWPPVSG SMMMGPDTFI NINNGQRTRI GSFAEWERRW
NGAWTTVLGA RNDVVAMNTG DVQGYDAMMY GADAAAFNAQ NHARTDVNFD GSALVRFDPD
PGSRYELGFA HRARSPNLYE RYAWSTNVMA MQMIGWFGDG NGYVGDINLK PEEANTVSLT
ATWRDPDKAA WELRATPYYS YVANYIDADR CALAGCLANL ATNLTTTDNF VYLQFANHNA
WLYGVNLDGK LNLWDTPEFG QGRVRANFNY VRGQRTDGID LYHIMPVNVT LALDQAYGGW
TSSIEVQIVG SKTLVSQVRN ELETSNYALL NLRLGYQWDA VKVDFGIENV LNANYFLPLG
GANLVNYQTT SMMGTATAWG FPVAGLGRSF NGRISVRF
|
|---|
| |