Gene Msil_0344 details

Gene Information

• Locus tag: Msil_0344
• Symbol: atpC
• ID: 7091563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 384129
• End bp: 384530
• Gene Length: 402 bp
• Protein Length: 133 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 643463678
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002360685
• Protein GI: 217976538
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 31
• Fosmid unclonability p-value: 0.0213495
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGGACT TTCATTTCGA GCTTGTTTCG CCTGAGCGGC TGGTATTTGC CGGCGCTGTC 
GAGTCCGTCG TCGTGCCTGG AACCGAGGGA CAATTTACGG TTCTGAAAGA TCACGCGCCG 
CTGATGACAA CGCTAAAGCC CGGCGTGATC GACATCGCCG AATCGAAAGC CTTGCTTCAT 
CGCTTTTTCG TGCGCGGGGG CTTCGCTGAA GTGTCGCCGG CAGGCCTCAC CATCCTGGCC 
GAGCAGGCGA TCCCGCTCGA AAGCCTCGAC GCCGCGCGGA TCGACGCCGA CATCAAGGAC 
GCCGAGGAGG ATATCGCCGA CGCCTCTGTC GATGAAACGC GGCGCCTCGC CGCTGAAAAG 
CGCGATCAGC TGCTTGAGCT CAAGGCCGCC CTCAAAATCT GA 

 

Protein sequence

MPDFHFELVS PERLVFAGAV ESVVVPGTEG QFTVLKDHAP LMTTLKPGVI DIAESKALLH 
RFFVRGGFAE VSPAGLTILA EQAIPLESLD AARIDADIKD AEEDIADASV DETRRLAAEK 
RDQLLELKAA LKI