Gene Msil_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_0200 
Symbol 
ID7090517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp210344 
End bp211117 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content66% 
IMG OID643463534 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_002360543 
Protein GI217976396 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.673335 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAGAGG CGGCGAAGGC TCCAGAGCTT CTGGCTCCGG GCGAACTGGA AAAGATCGCC 
CCGCCGTCGA CCTCGGCCTA TTTTCTCGAC GTCGACGGCA CGCTGCTGGA GATCAGGCAA
CGGCCCGAGG ACGTTCTGGC CGATGCAAAG CTGCGCGCGC TGCTCGGCGA CATAATGGGT
TTTTGCGGCG GCGCCGTCGC CTTGGTCAGC GGGCGCGCGA TCGCGGATCT CGACCGGATT
TTCGATCCCC TTATTTTGCC CGCCGCCGGG CTCCATGGGG CAGAGATTCG TTTTCCGGAC
GGCGCCCGCA CCTTTGCCGA CGCTTCGGCC GTCGATGACG CGCGGCCAAA ACTGCGGGCC
TTCGCGCAAA GGCATGAGGG CTTGCGGCTG GAGGACAAGG GAGCGACCCT GGCGCTGCAT
TTCCGTCAGC GGCCGGAGCT GGCCGAAGAG GCGCTGGCCT TCATGCAGGC GCTCGTAGAC
CGCCCGGAAC TTTCCGTTCA GCCGGGAAAG ATGGTCGCCG AACTGAAGCA GACCGCCCAT
ACCAAGGCGA CCGGCATCGC GAGCCTGATG GCGGGGGCGC CATTCCTTGG CCGCACGCCG
GTGTTCATCG GCGACGATCT GACCGATGAG ATCGGCTTTG GCTTCGTCAA TGAGCAGGGC
GGGGTTTCGA TCAGGATCGC CGCCATGGAG GCGTCGACTT CGGCGCAGTT CCGGCTGGCC
GATCCGGCGC AGTTGCGGAG CCAATTGACG GCGCTGCGCG GACAGGGCGC ATAG
 
Protein sequence
MVEAAKAPEL LAPGELEKIA PPSTSAYFLD VDGTLLEIRQ RPEDVLADAK LRALLGDIMG 
FCGGAVALVS GRAIADLDRI FDPLILPAAG LHGAEIRFPD GARTFADASA VDDARPKLRA
FAQRHEGLRL EDKGATLALH FRQRPELAEE ALAFMQALVD RPELSVQPGK MVAELKQTAH
TKATGIASLM AGAPFLGRTP VFIGDDLTDE IGFGFVNEQG GVSIRIAAME ASTSAQFRLA
DPAQLRSQLT ALRGQGA