| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0143 |
|---|
| Symbol | |
|---|
| ID | 7090459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 139512 |
|---|
| End bp | 140486 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643463476 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_002360486 |
|---|
| Protein GI | 217976339 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGC CCCACTTCGC AGATTATCTC GTCGAACGCA GGCTCTTGCG TCGGCGGCTT
TCCTTCTGGC GCATCCTCGC TTTCGGAGCC GCCGTGATCG GCGTTCTGGC GATTGGGCTG
CGGCTTGCCT CATCGGACGA CTCGGTGAGC TTTGCGCCGC ATATCGCAAG GCTGTCGATC
AGCGGCTTGA TCACCGGCGA CCGCGACACG CTCAAACTTA TTTCCAGGAT CGAGGAGTCG
GACGCCGCCG CGGTGCTGGT GTCGATCGAC AGTCCGGGCG GCACAACGGC GGGCGCGGAG
CGGCTTTACG ACCAGCTTCG CCGCCTTTCG GCCAAGAAGC CGACGGTCGC TGTCGTCGGC
TCGCTTGCCG CCTCCGGCGG CTATATCGCC GCGCTTGGGG CCGACCAGAT CGTCGCGCTG
GGCAATTCGC TGGTCGGATC GATCGGCGTC CTTGTCGAAT ATCCCAATGT GACGAAGCTG
CTCGATACGG TCGGGGTCAA GGTCGAAGCT GTCAAATCAT CGCCCTTGAA AGCGGCCCCG
AACGGCTTTG AGCCTACAAG CCCCGAGGCG CGCGCTGCGC TCGCCTCGCT GGTCGACGAC
AGTTTTGTCT GGTTCAAGGA TCTCGTGCGC GAGCGCCGCA ATCTGACCGC GCCGCAACTC
GCCGCGGTCG ATGACGGCCG CGTTTTTACC GGCCGGCAGG GGCTTGGTCT GCATCTCGTC
GATCGCCTCG GCGGCGAGAG GGAGGCGATC GCGTGGCTGG AGCAGGAAAG AGCTGTGCCA
AAGGGGCTGA AAATTCGCGA TTGGAAGCAG CAGGGCTCGT TCGGCCGCAT CGGTCTGTTC
AGCTTTGCCG CACGCGCCGC AAGCATTTTT CATTTAGACG AATTAAGCCG GCTTTTGGGG
CGCTCCAGCC AGTTTGTCGA GGCGCGGATG CTTGACGGTC TGGTCTCGAT TTGGCAAGTT
GACGGCGCGA ATTGA
|
|---|
| Protein sequence | MAAPHFADYL VERRLLRRRL SFWRILAFGA AVIGVLAIGL RLASSDDSVS FAPHIARLSI
SGLITGDRDT LKLISRIEES DAAAVLVSID SPGGTTAGAE RLYDQLRRLS AKKPTVAVVG
SLAASGGYIA ALGADQIVAL GNSLVGSIGV LVEYPNVTKL LDTVGVKVEA VKSSPLKAAP
NGFEPTSPEA RAALASLVDD SFVWFKDLVR ERRNLTAPQL AAVDDGRVFT GRQGLGLHLV
DRLGGEREAI AWLEQERAVP KGLKIRDWKQ QGSFGRIGLF SFAARAASIF HLDELSRLLG
RSSQFVEARM LDGLVSIWQV DGAN
|
|---|
| |