| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_0118 |
|---|
| Symbol | |
|---|
| ID | 7090435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 112792 |
|---|
| End bp | 113490 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643463452 |
|---|
| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
|---|
| Protein accession | YP_002360462 |
|---|
| Protein GI | 217976315 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0546] Predicted phosphatases |
|---|
| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGT CTCTCGCAAT CCCGCCGCTG CTGGTCTTCG ACCTCGACGG CACGCTGGCC
GACACCGCGG CCGACCTCGT CTCGACCCTG AACGCCATCT TGACCCAAGA AGGACTGGCG
GCCGTCTCTT TCAAGGACGC GCGCGCAATG GTCGGCGCCG GAGCCAAGGC GCTGCTGCAG
CGGGGGCTCA AGGCAAATGA CGTCGTCGTC GAAGAAGAGC GGCTCGATCA ATTATTCGCC
GACTATCTCG ATCATTACGA GGCGCATATC GCCGATGAGA GCGTGCTCTA TCCAGGCGTG
ACCGCCGCGC TCGACCGTTT CGAGGCGGCC GGCTGGAACT TTGCCGTCTG CACCAATAAA
TTCGAGGCGC CCTCGCGCCT GCTCTTGACC GCCCTCGGCA TCGCCGACCG GTTCAAGGCG
ATCTGCGGCA AGGACACATT CGCAGTGAGC AAGCCGGAAG GCGACGCTCT GCTGCAGACG
ATCGCCAAAG CCGGCGGCGA TCCGCGCCGT GCGATTATGG TCGGCGATTC CAAGACCGAT
ATCGACACGG CCCATAACGC CAAGGTTCCG GTCGTGGCCG TCACCTTCGG TTATACGGAT
CTGCCGGTCG AAACGTTCGA GCCGGATCGG ATCATCGGCC ATTTCGACGC GCTTTGGGAC
GCGGTCGAAG AGATTTCCGC CGTCTTCCAC GTCGCCTGA
|
|---|
| Protein sequence | MNKSLAIPPL LVFDLDGTLA DTAADLVSTL NAILTQEGLA AVSFKDARAM VGAGAKALLQ
RGLKANDVVV EEERLDQLFA DYLDHYEAHI ADESVLYPGV TAALDRFEAA GWNFAVCTNK
FEAPSRLLLT ALGIADRFKA ICGKDTFAVS KPEGDALLQT IAKAGGDPRR AIMVGDSKTD
IDTAHNAKVP VVAVTFGYTD LPVETFEPDR IIGHFDALWD AVEEISAVFH VA
|
|---|
| |