Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_0008 |
Symbol | |
ID | 7092336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 7360 |
End bp | 8346 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643463342 |
Product | 40-residue YVTN family beta-propeller repeat protein |
Protein accession | YP_002360354 |
Protein GI | 217976207 |
COG category | [S] Function unknown |
COG ID | [COG3391] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAACTG CGCTGAAATT TTCCGCGAGG GCGGCCGTCG TCTTAGCGCT CTCGCTTTCC TTCGCGCGCT CTCCCGCGAT GGCGGCGACG GCGTATGTCT CGAATGAAAA GGGCAACTCG ATCACCGTCA TCGACGACGC CAAGCTGGCG GTCGCCGACA CCGTCAAGGT CGGGCGGCGC CCGCGCGGAA TTGTTCTCAA CAAGGACAAC ACCCAGCTGT TCATCTGCGC CGGCGATGAC GACACGATCC AGATTCTCGA TCTCAAGACT TTGAAGATCG TCGGCGATCT GCCGTCGGGC GCCGACCCCG AATTGCTGAT TCTGAGCCCG GACGGCGCTC TCCTTTATGT CGCGAATGAG AACAACAATC TTGTCACCGT GATCGACGTG GCGACGCGCA AGGTCCTCGA GCAGATTCCG GTTGGAGTCG AGCCGGAGGG CATGGCGCTG AGCCCTGACG GGAAAATTCT CGTCAACACC TCCGAAACGA CCAATATGGC CCACATGATC GATACGGCGA CGCGCAAGAT CTTCGCCAAT GTCCTCGTCG ACGCGCGGCC GCGCTCCGCC CAGTTCACGC CAGACGGCAA GGAGCTGTGG GTGTCGGCGG AGGTCGGCGG CACGGTGAGC GTCATCAGCG TCGCCGACGC CAAGGTGCTG CAGAAAATCA CCTTCGATAT TCCCGGTCTC GCCAAGGAGG CGATTCAGCC CGTCGGCATC CGCTTCAGCC AGGACGGCGC GAAGGCCTTT GTCGCGCTTG GACCGGCAAA TCGCGTCGCC GTCATCGATG TCGCCTCGCG CAAGGTCGCG AAATATCTGC TGGTCGGCCA ACGCGTCTGG CAACTGGCCT TCACGCCCGA CTACAGCCAT CTTTACGCGA CCAACGGCGT CTCGAACGAC GTTTCCGTGA TCGACCCCGC GAGCCTCAAG GTCGTGAAAT CGATTCCCGT CGGTCCGTTC CCCTGGGGCG TCGCCATCGC GCCATAG
|
Protein sequence | MQTALKFSAR AAVVLALSLS FARSPAMAAT AYVSNEKGNS ITVIDDAKLA VADTVKVGRR PRGIVLNKDN TQLFICAGDD DTIQILDLKT LKIVGDLPSG ADPELLILSP DGALLYVANE NNNLVTVIDV ATRKVLEQIP VGVEPEGMAL SPDGKILVNT SETTNMAHMI DTATRKIFAN VLVDARPRSA QFTPDGKELW VSAEVGGTVS VISVADAKVL QKITFDIPGL AKEAIQPVGI RFSQDGAKAF VALGPANRVA VIDVASRKVA KYLLVGQRVW QLAFTPDYSH LYATNGVSND VSVIDPASLK VVKSIPVGPF PWGVAIAP
|
| |