Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2277 |
Symbol | |
ID | 5104229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2177352 |
End bp | 2178404 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640508174 |
Product | small GTP-binding protein |
Protein accession | YP_001192339 |
Protein GI | 146305023 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.92801 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGCTA CCCTTTTCGT ATCCCAAGAC TTCGCTGACG AGGCCGTATC CCTACTTGAG ACCGCAGGAT ATGAGGTAGA GAAGACCTAT CCTCTTCCCT CTAAACCCAA CAGGTTATAT TACATCCCTC AGGACAAACT GAAACTCCTG CAGGACCAGG AAACTGACGC GGTGGTGGTC TTTGACCTTC TCTCCCCAAG GCACTTCATC AACCTTAACA GGTCACTGAA TGGGAAGAAG GTACTGGATA AGCTTCTGAT TCTCCTTGAA ATATTTGCAC TTCATGCCGG ATCAAAGGAG GCTAAACTTC AAATTGAACT AGCCAGATTA AAGTATGAAT TACCAATTAT CAAAGATATA TACAGTAAAA CTAAAATATC TGAGCAACAG GGGCCCCTGG GTGCAGGTAC CTACGGTGTA GAGTCCGCTT TGAGACTCTA CAACCGCAAA ATATCCAAGA TAACGAAGGA ATTGGAGGGA CTAAAGAAGT TCAGAGAGAT GCAAATGCAA AATAGGAGGG AAGAATTTCC CTATGTAGCT ATCACAGGCT ACACCAACGC GGGTAAAACC TCGATCTTCA ACGCGCTAAC CGGGCTAAAC AAACCAACGG ATCAGTCGAT GTTCACCACT ACTGCACCAA AGAGATACGC TATACCCATT GGTTCCAAAA AGGTAACATT GGTAGATACT GTGGGATTCA TTAGGGGAAT TCCTCCCCAG ATTATCGATG CCTTCTTCGT TACGCTGTCG GAGATAAGAT ATGCCAATGC CCTCCTGCTC GTGGTTGATA TCTCTCTTGA GGACTCCCTC CTCTTAGAAA TGACAAGATC CTCCTTCGAG ATCCTTAGGG AGCTGGGGAT ATCTGGCAAA CCCATGATCA TAGTGGGTAA TAAGGCCGAT CTGGTGGACG GAAGGTCTAA GGAGAAGATG GACATGGTAT ACTCCCTCAG TGATAACCTA TACTCTCCCG TTGTGGATGC AATCTTAGTT TCAGCTAAAA AGGGATGGAA CCTAGATAGT CTGAGGGATA AGATATTCTC CCTAGTCAAC TGA
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Protein sequence | MKATLFVSQD FADEAVSLLE TAGYEVEKTY PLPSKPNRLY YIPQDKLKLL QDQETDAVVV FDLLSPRHFI NLNRSLNGKK VLDKLLILLE IFALHAGSKE AKLQIELARL KYELPIIKDI YSKTKISEQQ GPLGAGTYGV ESALRLYNRK ISKITKELEG LKKFREMQMQ NRREEFPYVA ITGYTNAGKT SIFNALTGLN KPTDQSMFTT TAPKRYAIPI GSKKVTLVDT VGFIRGIPPQ IIDAFFVTLS EIRYANALLL VVDISLEDSL LLEMTRSSFE ILRELGISGK PMIIVGNKAD LVDGRSKEKM DMVYSLSDNL YSPVVDAILV SAKKGWNLDS LRDKIFSLVN
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