| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2275 |
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| Symbol | |
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| ID | 5104227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2175621 |
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| End bp | 2176760 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640508172 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_001192337 |
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| Protein GI | 146305021 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH
[TIGR01242] 26S proteasome subunit P45 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.575549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAGATG AGCACGCGGT GAGGATACTG GAGGAGAAGA TAAGGACAAT GCAAATGGAG
GCAGAGAGCC TGAGAAAGGA ACTGAACTAC TACAAGTCTG AGATGGAGAA GTTGTTAAGT
CCGCCACTTA TTGAGGCAAT CGTTCTGGAC ATCCTCGAAG ATGGTAGAGT TGTGGTTAAG
AGTACCTCGG GTCCAAACCT AGTAGTCAAC GTCTCAGGAA CGGTGGACTT TAGTTCCATT
AAAGTAGGCA GATATGTGGC TCTAAATCAA AGGGGCTCGG CGGTAGTAGA GGTGCTGAGG
GACAGGGATG ATCCTTTGGT TAGATCAATG GAGGTGGTAG AGAGACCCAA CGTGAGATAC
CAAGATATAG GTGGGTTGGA TCAACAAATT CAGGAAGTGA GAGAGGTAGT AGAGCTCCCC
CTTAAGAAGC CCGAACTATT CAAGGAACTT GGGATTACTC CCCCTAAGGG TATACTTCTA
TACGGTCCAC CTGGTACTGG AAAAACCATG TTGGCGAAGG CGGTGGCCAC AGAGAGTAAC
GCCTCGTTCA TACATGTTGT GGCCTCCGAG TTTGCTCAGA AGTTTGTGGG AGAAGGGGCC
AGGGTGGTCA GGGATGTATT TGAACTGGCA AGAAAGAAGG CACCCTCCAT TGTATTCATT
GATGAAATAG ACGCCATCGG AGCTAAGAGG GTTGATTTGG GGACCAGTGG AGAGAGGGAA
GTTCAAAGAA CGCTAATGCA ACTCCTTGCA GAGATAGACG GCTTCCAACC CTTGGACAAC
GTGAAAATCA TTGCAGCGAC CAATAGAATA GACATACTTG ATCCTGCTCT TCTAAGGCCA
GGAAGATTTG ACAGGCTGAT AGAGATCCCA TTGCCAAACA TTGAAGGGAG AAAGCAGATA
CTGAGAATCT ACCTCCAAAA AATGAAGGTG GATAATTCGG TTAACGTAGA TGAGCTAGCC
ATGATGACCG AAGGATTCAG CGGAGCAGAC CTTAGGAATC TCTGTACCGA AGCGGGTTAT
ATCGCAATAA GGAATGACAG TAATGTTATC AGTATGACTC ATTTCAAGAG CGCTATTGAA
AGGTTGAGAT CCAAAAAATT AAGTAAGGAA GTTGTGGATA GGGGAGAGAA GTATGTATGA
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| Protein sequence | MTDEHAVRIL EEKIRTMQME AESLRKELNY YKSEMEKLLS PPLIEAIVLD ILEDGRVVVK
STSGPNLVVN VSGTVDFSSI KVGRYVALNQ RGSAVVEVLR DRDDPLVRSM EVVERPNVRY
QDIGGLDQQI QEVREVVELP LKKPELFKEL GITPPKGILL YGPPGTGKTM LAKAVATESN
ASFIHVVASE FAQKFVGEGA RVVRDVFELA RKKAPSIVFI DEIDAIGAKR VDLGTSGERE
VQRTLMQLLA EIDGFQPLDN VKIIAATNRI DILDPALLRP GRFDRLIEIP LPNIEGRKQI
LRIYLQKMKV DNSVNVDELA MMTEGFSGAD LRNLCTEAGY IAIRNDSNVI SMTHFKSAIE
RLRSKKLSKE VVDRGEKYV
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