Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2273 |
Symbol | |
ID | 5104225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 2174399 |
End bp | 2175124 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640508170 |
Product | hypothetical protein |
Protein accession | YP_001192335 |
Protein GI | 146305019 |
COG category | [R] General function prediction only |
COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.222464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGATA CGAAAGTAAT TCTGAAAGAC GTCTCAGAGA GCGAGCTGGC CAATTCCAGA TTCATCTCAG GTTTCAGGAC CCTAGGTGAG GTTGGTTACC TATCAGTGAG GCATATTGTT CTATCAAGAA AGATGAGAAG GGTAGGGTTT GTGACCACGA AATACCTTAG GGATGTTACT TTTCTTGATG ACTATGGAGT TGCCACACCC TTTGAGTTAT TTTATGATGA GGAGTTCAGG GTTCTAGTAC TCTTAAATCA TCTGCTCCCA TTTCAAAGGG AGTGGAGTAG CTTCACTCAT GGCCTAGTTA AATGGTTAAA GAGGATACAG GTGAAGGACT CCATTCTAAT AGGAGGCTTA GATAAGAGGT ATAAGGACGT TAATGAGCCC ATAAAGTGGA TGAGGACCAG CAAAAGCACA ATTGATTTAC CCTATCCCAC TCTTAACAAA CAGTTAATCA TGGTAGGACC ACTGGCCCTG TTTACAGTTT ACGCAGAAAT AGAGGATCTT CCAGCAACTA TTCTACTTCC GTATGCGGAT AGGGAGAGAT TAGATCCAGG AGCAGCTGCT GTGGCAGTAG ATGTAATAAA CAAACTAATT GGGTTCAATA TAGATACAAG AGAGCTTTAC GAGGATGCCA AGAAAATAGA GCAGGAACTC CAAAGGCAGC TTGAAATGAT ACAAAAGGAA ATTTCAAAGA GTGGGGTTGA TAGACATTAT ATGTGA
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Protein sequence | MEDTKVILKD VSESELANSR FISGFRTLGE VGYLSVRHIV LSRKMRRVGF VTTKYLRDVT FLDDYGVATP FELFYDEEFR VLVLLNHLLP FQREWSSFTH GLVKWLKRIQ VKDSILIGGL DKRYKDVNEP IKWMRTSKST IDLPYPTLNK QLIMVGPLAL FTVYAEIEDL PATILLPYAD RERLDPGAAA VAVDVINKLI GFNIDTRELY EDAKKIEQEL QRQLEMIQKE ISKSGVDRHY M
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