Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_2272 |
Symbol | |
ID | 5104224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 2172935 |
End bp | 2174431 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640508169 |
Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
Protein accession | YP_001192334 |
Protein GI | 146305018 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.512273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGTG ACTTTGAAGT AAAGGATGAG GATCTGGCTG GTAGAATAGG GATACTGGAA ACCAAACATG GTAAGCTCGA AACTCCAGTT TTTTTCCCAG TCATAAATCC CCTTAAGCAG GAGGTATTCC TAGAGGAACT CAAGGCCGTA GGCTTTAATA ATTTTATTAC AAATTCATTC ATACTAAAGA AAAATAATAT TCTCCAAGGC ACTATTCACG AGAAGTTTGG GGATAATTTC GTAATTATGA CGGATTCTGG AGCATACCAA ATACTTGAAT ATGGTGAGAT AGAGCAGACA AATAGGGATA TTGTATCATT CGAGGCGAAA ATTAGGCCAG ATATAGCGGT GTTCCTAGAT ATACCAACTG GCAATACTGA CGACCGAGAA GAGGCAAAGT TCTCAGTGGA GATGACCCTA GAGAGAGGGA AGGAAATCGC TGACATTGTG GACCAGAACG AGGATATTAT CTGGGTTCAT CCTATTCAGG GAGGTCAGTT TCTTGATCTA GTGGAGTATT CAGCTAGGGA AGCCAATAAA AGAACCAACT ACAAGATGTT GGCTCTTGGA AGCCCTACGG TTTTCATGGA GAAGTATAAA TATGATACCC TAGTAGACAT GATCTATACC GCTAAGTCGA GCGTAAGTAG GGGTGTTCCC TTCCACCTAT TTGGAGGCGG TGTTCCCCAT ATAATTCCCT TTGCCGTAGC TTTGGGCGTG GATTCGTTTG ACTCTGCATC CTATGCTATT TTCGCTAGAG ATAATAGGTA CTTGACGAGC GAGAGAACTT ATAGACTTGA GGACCTTGAG TACTTCCCGT GCAGTTGTCC TGTTTGTTCT AGATACGATC CGTCAGAACT ACTGGAGATG AAATCCGAAG AGAGATACAA ACTTCTGGCT ATCCATAACC TTTGGAAGAT AAGGGAGGAA GTGAACAGGG TAAAGCAGGC CATTAAGGAA GGAAGATTGT TTGAATATAT TCAACAGAAA GCTTACTCGC ACCCAGCTCT CTATTCAGCC TTTAAATCAA TACTCAAATA CTCCAGTTAT CTAGAGAAAT ACGATCCGAG GGTCAAAGGC AACGTTAAGG GACTCCTGCT ATTTGATCAT AATTCCATGA ACAGGCCTGA ACTTCTGAGA CATTCAGAAT TTATGGCAAA TCTGAAACCC AAGAGGAACA AGGTAATAAT AATTTGTGGC GATAAATTAG GTAGTCCCTT TATTTCAGAC CCTAAGGTCA AATCGATACA AGGAAGGAAC AGAGACTACG ATACATTCGT AGCGCTTCCC TTCTATGGCC TAGTACCTGT TATGGCATCT GAAGCGTTCC CATTATCGCA GTTCGAGATT CCTGACATAA TAGACGATAC CACATTAAAT GAAACAATAC TGAAAATAAA AGAGACCTTG CGCAATAAAA ATTACGCAGA GATAAAGTTC ATGGAATGTG AAAAATCTGT ACTATCACAT ATAATGTCTA TCAACCCCAC TCTTTGA
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Protein sequence | MIGDFEVKDE DLAGRIGILE TKHGKLETPV FFPVINPLKQ EVFLEELKAV GFNNFITNSF ILKKNNILQG TIHEKFGDNF VIMTDSGAYQ ILEYGEIEQT NRDIVSFEAK IRPDIAVFLD IPTGNTDDRE EAKFSVEMTL ERGKEIADIV DQNEDIIWVH PIQGGQFLDL VEYSAREANK RTNYKMLALG SPTVFMEKYK YDTLVDMIYT AKSSVSRGVP FHLFGGGVPH IIPFAVALGV DSFDSASYAI FARDNRYLTS ERTYRLEDLE YFPCSCPVCS RYDPSELLEM KSEERYKLLA IHNLWKIREE VNRVKQAIKE GRLFEYIQQK AYSHPALYSA FKSILKYSSY LEKYDPRVKG NVKGLLLFDH NSMNRPELLR HSEFMANLKP KRNKVIIICG DKLGSPFISD PKVKSIQGRN RDYDTFVALP FYGLVPVMAS EAFPLSQFEI PDIIDDTTLN ETILKIKETL RNKNYAEIKF MECEKSVLSH IMSINPTL
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