| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2272 |
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| Symbol | |
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| ID | 5104224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 2172935 |
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| End bp | 2174431 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640508169 |
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| Product | 7-cyano-7-deazaguanine tRNA-ribosyltransferase |
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| Protein accession | YP_001192334 |
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| Protein GI | 146305018 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00432] tRNA-guanine transglycosylase, archaeosine-15-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.512273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGGTG ACTTTGAAGT AAAGGATGAG GATCTGGCTG GTAGAATAGG GATACTGGAA
ACCAAACATG GTAAGCTCGA AACTCCAGTT TTTTTCCCAG TCATAAATCC CCTTAAGCAG
GAGGTATTCC TAGAGGAACT CAAGGCCGTA GGCTTTAATA ATTTTATTAC AAATTCATTC
ATACTAAAGA AAAATAATAT TCTCCAAGGC ACTATTCACG AGAAGTTTGG GGATAATTTC
GTAATTATGA CGGATTCTGG AGCATACCAA ATACTTGAAT ATGGTGAGAT AGAGCAGACA
AATAGGGATA TTGTATCATT CGAGGCGAAA ATTAGGCCAG ATATAGCGGT GTTCCTAGAT
ATACCAACTG GCAATACTGA CGACCGAGAA GAGGCAAAGT TCTCAGTGGA GATGACCCTA
GAGAGAGGGA AGGAAATCGC TGACATTGTG GACCAGAACG AGGATATTAT CTGGGTTCAT
CCTATTCAGG GAGGTCAGTT TCTTGATCTA GTGGAGTATT CAGCTAGGGA AGCCAATAAA
AGAACCAACT ACAAGATGTT GGCTCTTGGA AGCCCTACGG TTTTCATGGA GAAGTATAAA
TATGATACCC TAGTAGACAT GATCTATACC GCTAAGTCGA GCGTAAGTAG GGGTGTTCCC
TTCCACCTAT TTGGAGGCGG TGTTCCCCAT ATAATTCCCT TTGCCGTAGC TTTGGGCGTG
GATTCGTTTG ACTCTGCATC CTATGCTATT TTCGCTAGAG ATAATAGGTA CTTGACGAGC
GAGAGAACTT ATAGACTTGA GGACCTTGAG TACTTCCCGT GCAGTTGTCC TGTTTGTTCT
AGATACGATC CGTCAGAACT ACTGGAGATG AAATCCGAAG AGAGATACAA ACTTCTGGCT
ATCCATAACC TTTGGAAGAT AAGGGAGGAA GTGAACAGGG TAAAGCAGGC CATTAAGGAA
GGAAGATTGT TTGAATATAT TCAACAGAAA GCTTACTCGC ACCCAGCTCT CTATTCAGCC
TTTAAATCAA TACTCAAATA CTCCAGTTAT CTAGAGAAAT ACGATCCGAG GGTCAAAGGC
AACGTTAAGG GACTCCTGCT ATTTGATCAT AATTCCATGA ACAGGCCTGA ACTTCTGAGA
CATTCAGAAT TTATGGCAAA TCTGAAACCC AAGAGGAACA AGGTAATAAT AATTTGTGGC
GATAAATTAG GTAGTCCCTT TATTTCAGAC CCTAAGGTCA AATCGATACA AGGAAGGAAC
AGAGACTACG ATACATTCGT AGCGCTTCCC TTCTATGGCC TAGTACCTGT TATGGCATCT
GAAGCGTTCC CATTATCGCA GTTCGAGATT CCTGACATAA TAGACGATAC CACATTAAAT
GAAACAATAC TGAAAATAAA AGAGACCTTG CGCAATAAAA ATTACGCAGA GATAAAGTTC
ATGGAATGTG AAAAATCTGT ACTATCACAT ATAATGTCTA TCAACCCCAC TCTTTGA
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| Protein sequence | MIGDFEVKDE DLAGRIGILE TKHGKLETPV FFPVINPLKQ EVFLEELKAV GFNNFITNSF
ILKKNNILQG TIHEKFGDNF VIMTDSGAYQ ILEYGEIEQT NRDIVSFEAK IRPDIAVFLD
IPTGNTDDRE EAKFSVEMTL ERGKEIADIV DQNEDIIWVH PIQGGQFLDL VEYSAREANK
RTNYKMLALG SPTVFMEKYK YDTLVDMIYT AKSSVSRGVP FHLFGGGVPH IIPFAVALGV
DSFDSASYAI FARDNRYLTS ERTYRLEDLE YFPCSCPVCS RYDPSELLEM KSEERYKLLA
IHNLWKIREE VNRVKQAIKE GRLFEYIQQK AYSHPALYSA FKSILKYSSY LEKYDPRVKG
NVKGLLLFDH NSMNRPELLR HSEFMANLKP KRNKVIIICG DKLGSPFISD PKVKSIQGRN
RDYDTFVALP FYGLVPVMAS EAFPLSQFEI PDIIDDTTLN ETILKIKETL RNKNYAEIKF
MECEKSVLSH IMSINPTL
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