| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_2257 |
|---|
| Symbol | |
|---|
| ID | 5104208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 2158767 |
|---|
| End bp | 2160056 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640508154 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_001192319 |
|---|
| Protein GI | 146305003 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.266862 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATACA AATTTATACT ATACTGTATC GTTGATCTCA TGAATTATCG TATTAAGGAT
ATATCCCTTG CGGATCAGGG TCAAGCCCAA CTAGAGTGGG CAGAACTGCA TATGCCAGCT
CTCATGAGCA TACAAAGGGA ATTAGAGAGA ACGAAACCTC TAAAAGGAGT AAGAATTGCA
GCAGTATTAC ATGTTACCAA GGAAACTGGA GTTCTAATGA AGACCCTTAA ACTTGCTGGT
GCAGAGGTAT CCCTAGCAGC TAGCAATCCC CTGTCCACTC AAGATGACAT AGCTGCTGCG
CTGGTGAAAA AATATGAGAT CAACGTGTTT GCATGGAAAG GAGAAAACGA GCAGGACTAC
TATGACAACA TAAGGTCAAT TGTGGAGACT AAACCGCAAA TAGTAATGGA TGATGGTGGA
GATCTACATG CTTACTTACA CGAGAATAAC CTTTACAGTA ACGTGATAGG TGGCACCGAG
GAGACGACTA CTGGCGTGGT TAGGCTAAAG GCCATGGAAG AGGATGGTGT TCTGAAGTAT
CCAGTTATTG CCGTAAATAA CGCGTTCACC AAATATCTCT TTGACAATAG ATTCGGTACT
GGACAGAGCG CAATTGACGG AGTTCTTAGG GCAACTAACA TTCTAATAGC CGGAAAGATA
TGCGTGGTTG CAGGCTACGG TTGGGTAGGT AGGGGAATAG CTTCTAGACT CAGGGGGCTT
GGGGGTAGAG TAATAGTGGT AGAAGCTAAC CCATTAAGGG CATTAGAGGC CGTGATGGAA
GGATTCGAAG TGATGACCAT GAAAGAGGCA TCTAAGATAG GAGACTTATT TATCACGGCC
ACAGGTAATA TTAGGGCAAT ATCTAAGGAG CACATCCTTA ATATGAAGGA CGGAGCGATC
CTTGCCAATG CGGGTCATTT CAACGTGGAA ATAGATGTCG ATGGGCTAAG AAAGATGGCT
AAGAGCAGGA GGATCATTAG GCCATATACC GAGGAAAATG TATTGTCCGA TGGAAGGAGA
ATATACCTTC TGGCAGATGG AAGATTAGTG AATTTAGCTG CGGGTGAAGG ACATCCCAGC
GAGGTTATGG ACCTTAGTTT CTCGAACCAG GCTCTATCTG TACTTTACAT CTACCAGAAC
AGAGGGTCCC TAATGCCAAA AGTCTATGAT GTTCCCCAGG ATATCGATGA GAGAGTAGCT
AAATTAAAAC TAGACTCGAT GGGAATACAA GTGGAGCAAC TAACAAAGGA ACAGGTTGAA
TATTCTAAAC AATGGAGATA TGGTACCTAA
|
|---|
| Protein sequence | MAYKFILYCI VDLMNYRIKD ISLADQGQAQ LEWAELHMPA LMSIQRELER TKPLKGVRIA
AVLHVTKETG VLMKTLKLAG AEVSLAASNP LSTQDDIAAA LVKKYEINVF AWKGENEQDY
YDNIRSIVET KPQIVMDDGG DLHAYLHENN LYSNVIGGTE ETTTGVVRLK AMEEDGVLKY
PVIAVNNAFT KYLFDNRFGT GQSAIDGVLR ATNILIAGKI CVVAGYGWVG RGIASRLRGL
GGRVIVVEAN PLRALEAVME GFEVMTMKEA SKIGDLFITA TGNIRAISKE HILNMKDGAI
LANAGHFNVE IDVDGLRKMA KSRRIIRPYT EENVLSDGRR IYLLADGRLV NLAAGEGHPS
EVMDLSFSNQ ALSVLYIYQN RGSLMPKVYD VPQDIDERVA KLKLDSMGIQ VEQLTKEQVE
YSKQWRYGT
|
|---|
| |